C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000602871 ATP5G2-010 ENSG00000135390 9606 - 12:53665166-53676115 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000602871
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000602871 184.665±0.00 243.171±0.00 19.744±0.00 103.739±19.16 106.174±84.60 171.485±139.93 172.278±119.54 160.161±106.61 100.834±63.46 119.697±93.93 288.475±103.24 143.679±105.38 230.743±82.53 119.587±63.67

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B4 CIL_0009B4_0001 VISTA 12:53396852-53997557
CIL_00061S CIL_00061S_0001 CGP 12:53507856-53677408
CIL_00003I CIL_00003I_0001 CGP 12:53632726-53727745

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 NAS transporter activity
GO:0005753 TAS mitochondrial proton-transporting ATP synthase complex
GO:0008289 IEA lipid binding
GO:0015078 IEA hydrogen ion transmembrane transporter activity
GO:0015986 IEA ATP synthesis coupled proton transport
GO:0015991 IEA ATP hydrolysis coupled proton transport
GO:0016021 IEA integral component of membrane
GO:0033177 IEA proton-transporting two-sector ATPase complex, proton-transporting domain
GO:0045263 IEA proton-transporting ATP synthase complex, coupling factor F(o)

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000185641 Atp5g2-001 protein_coding Mus_musculus 0 704
ENSMUST00000086013 Gm10175-201 protein_coding Mus_musculus 0 617
ENSMUST00000181584 Gm10231-001 processed_pseudogene Mus_musculus 0 497
ENSMUST00000075630 Atp5g2-201 protein_coding Mus_musculus 0 497
ENSMUST00000187160 Atp5g2-003 protein_coding Mus_musculus 0 326
ENSMUST00000178611 Atp5g1-201 protein_coding Mus_musculus 0 289
ENSMUST00000107684 Atp5g1-002 protein_coding Mus_musculus 0 289
ENSMUST00000107686 Atp5g1-003 protein_coding Mus_musculus 0 289
ENSMUST00000090541 Atp5g1-001 protein_coding Mus_musculus 0 289
ENSMUST00000081241 Gm10039-001 processed_pseudogene Mus_musculus 0 283

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