C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00061S_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000170653-ENSG00000135390 CGP 9606 12:53507856-53677408
GeneTranscriptPositionBiotype
ENSG00000170653 (ATF7)
activating transcription factor 7 		ENST00000420353 (ATF7-001) 53512059-53626407 protein_coding
ENST00000456903 (ATF7-006) 53513442-53626000 protein_coding
ENST00000546661 (ATF7-003) 53516649-53524976 processed_transcript
ENST00000548118 (ATF7-009) 53542887-53625996 protein_coding
ENST00000548446 (ATF7-007) 53507856-53626370 protein_coding
ENST00000550373 (ATF7-008) 53543091-53543951 processed_transcript
ENST00000551087 (ATF7-004) 53515781-53523269 processed_transcript
ENST00000551480 (ATF7-005) 53534542-53625979 protein_coding
ENST00000588078 (ATF7-011) 53534606-53625971 protein_coding
ENST00000588232 (ATF7-010) 53534540-53626363 protein_coding
ENST00000589726 (ATF7-013) 53600752-53626387 retained_intron
ENST00000591397 (ATF7-002) 53542887-53626410 protein_coding
ENSG00000257550 (RP11-793H13.3)
 ENST00000548347 (RP11-793H13.3-001) 53513984-53517608 antisense
ENSG00000275488 (RP11-793H13.12)
 ENST00000617434 (RP11-793H13.12-001) 53574632-53576103 processed_pseudogene
CIL_00061S_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000099083-ENSMUSG00000062683 CGP 10090 15:102525946-102672352
GeneTranscriptPositionBiotype
ENSMUSG00000036305 (Rpl39-ps)
ribosomal protein L39, pseudogene 		ENSMUST00000142604 (Rpl39-ps-002) 102634982-102635336 processed_transcript
ENSMUST00000146505 (Rpl39-ps-001) 102635038-102635188 transcribed_processed_pseudogene
ENSMUSG00000062683 (Atp5g2)
ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C2 (subunit 9) 		ENSMUST00000075630 (Atp5g2-201) 102663014-102667749 protein_coding
ENSMUST00000185641 (Atp5g2-001) 102662864-102671127 protein_coding
ENSMUST00000186952 (Atp5g2-002) 102665801-102672352 protein_coding
ENSMUST00000187160 (Atp5g2-003) 102664739-102667743 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00061S_0001ENSG00000170653ENST00000420353ENST00000456903ENST00000546661ENST00000548118ENST00000548446ENST00000550373ENST00000551087ENST00000551480ENST00000588078ENST00000588232ENST00000589726ENST00000591397ENSG00000257550ENST00000548347ENSG00000275488ENST00000617434CIL_00061S_0002ENSMUSG00000036305ENSMUST00000142604ENSMUST00000146505ENSMUSG00000062683ENSMUST00000075630ENSMUST00000185641ENSMUST00000186952ENSMUST00000187160
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00061S_0001ENSG00000170653ENST00000420353ENST00000548118ENST00000550373ENST00000588078ENST00000591397ENSG00000257550ENST00000548347ENSG00000275488ENST00000617434CIL_00061S_0002ENSMUSG00000036305ENSMUST00000142604ENSMUSG00000062683ENSMUST00000075630ENSMUST00000185641
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000170653 ENST00000420353 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.614±0.00 N/A 3.505±2.34 N/A N/A
ENST00000456903 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000546661 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548118 N/A N/A N/A 1.111±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548446 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550373 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.606±0.00 N/A N/A N/A
ENST00000551087 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551480 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588078 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.096±0.00 5.751±0.00 6.443±0.00
ENST00000588232 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589726 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591397 N/A N/A N/A N/A N/A N/A N/A N/A 1.826±0.00 N/A N/A 3.111±0.00 4.089±0.00 3.816±0.00
ENSG00000257550 ENST00000548347 9.684±0.00 5.442±0.00 1.030±0.00 2.996±2.60 4.686±3.68 4.539±3.82 2.636±2.43 3.136±2.49 1.354±0.49 6.369±4.38 7.905±0.00 4.053±3.79 3.259±1.61 4.227±2.72
ENSG00000275488 ENST00000617434 0.014±0.00 0.058±0.00 0.468±0.00 0.029±0.00 0.070±0.00 0.036±0.00 0.041±0.03 N/A 0.056±0.03 0.287±0.17 N/A 0.016±0.00 N/A 0.079±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000036305 ENSMUST00000142604 10.803±1.16 N/A 10.726±0.60 4.800±3.13 4.301±2.25 1.274±0.63 2.734±1.70 2.034±0.57 28.110±23.73 1.957±0.51 2.835±0.54 3.023±1.48 1.472±1.26 0.445±0.22
ENSMUST00000146505 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000062683 ENSMUST00000075630 N/A N/A N/A 26.205±0.00 N/A N/A N/A N/A N/A N/A 78.560±15.87 121.527±42.64 126.451±77.40 N/A
ENSMUST00000185641 243.985±36.42 417.055±65.32 180.791±8.47 126.899±76.56 286.846±93.06 429.488±106.72 302.705±109.91 402.369±32.07 215.192±32.68 214.543±16.32 150.460±41.58 262.934±137.64 119.963±103.49 36.227±16.69
ENSMUST00000186952 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187160 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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