C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: post-GPI attachment to proteins 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000423035 PGAP1-002 ENSG00000197121 9606 - 2:196835184-196926655 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainHeartLiverLungOvaryPlacentaTestisENST00000423035
Transcript ID Adipose Brain Heart Liver Lung Ovary Placenta Testis
ENST00000423035 0.371±0.00 0.582±0.01 0.171±0.01 1.350±0.00 0.402±0.00 0.965±0.35 0.223±0.03 0.540±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002KE CIL_0002KE_0001 CGP 2:196833004-197311173

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000097739 Pgap1-001 protein_coding Mus_musculus 0 3286
ENSMUST00000185817 Pgap1-004 retained_intron Mus_musculus 0 1544
ENSMUST00000189506 Pgap1-002 retained_intron Mus_musculus 0 209

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