C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cystin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000186602 Cys1-201 ENSMUSG00000062563 10090 - 12:24665848-24681795 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000186602
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000186602 0.183±0.00 0.341±0.12 6.598±0.62 0.096±0.00 0.146±0.00 0.338±0.00 0.550±0.00 9.251±2.90 0.634±0.35 1.756±0.31 0.814±0.53 0.924±0.56 1.568±1.65 0.079±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007DF CIL_0007DF_0002 CGP 12:24651371-24681813
CIL_0007DI CIL_0007DI_0002 CGP 12:24665838-24714146

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001822 IMP kidney development
GO:0003674 ND molecular_function
GO:0005886 IEA plasma membrane
GO:0005930 IDA axoneme
GO:0036064 IDA ciliary basal body
GO:0045121 IDA membrane raft
GO:0048839 IMP inner ear development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000381813 CYS1-001 protein_coding Homo_sapiens 4e-34 150

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