C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 9142
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000187161 RP24-347J6.5-001 ENSMUSG00000099394 10090 + 7:32358928-32359882 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartKidneyLiverMusclePlacentaTestisENSMUST00000187161
Transcript ID Adipose Brain Breast Heart Kidney Liver Muscle Placenta Testis
ENSMUST00000187161 0.036±0.00 0.004±0.00 0.061±0.02 0.032±0.00 0.059±0.04 0.010±0.01 0.045±0.00 0.005±0.00 0.054±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 689
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 689
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 689
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 689
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 689
ENST00000398586 GAPDHP15-001 processed_pseudogene Homo_sapiens 0 298
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 520
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 678
ENST00000436626 GAPDHP48-001 processed_pseudogene Homo_sapiens 0 387
ENST00000436818 GAPDHP26-001 processed_pseudogene Homo_sapiens 0 490
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 472
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 339
ENST00000444107 GAPDHP20-001 processed_pseudogene Homo_sapiens 0 425
ENST00000450472 GAPDHP14-001 processed_pseudogene Homo_sapiens 0 267
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 664
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 2e-26 124
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 689
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 689
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 435
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 553
ENST00000513953 RP11-44N17.1-001 processed_pseudogene Homo_sapiens 0 355
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 329
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 689

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