C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | CLOCK interacting protein, circadian | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000187814  |
Cipc-001 |
ENSMUSG00000034157 |
10090 | + |
12:86947343-86965362  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007VF | CIL_0007VF_0002 | VISTA | 12:86500572-87103602 |
| CIL_0008WP | CIL_0008WP_0002 | VISTA | 12:86510598-87113301 |
| CIL_000867 | CIL_000867_0002 | VISTA | 12:86515545-87117582 |
| CIL_0007VT | CIL_0007VT_0002 | VISTA | 12:86594665-87199694 |
| CIL_0003P0 | CIL_0003P0_0002 | CGP | 12:86880703-86965362 |
| CIL_00071S | CIL_00071S_0002 | CGP | 12:86947043-86988676 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IPI | protein binding |
| GO:0005634 | IDA | nucleus |
| GO:0006351 | IEA | transcription, DNA-templated |
| GO:0042754 | IMP | negative regulation of circadian rhythm |
| GO:0045892 | IDA | negative regulation of transcription, DNA-templated |
| GO:0048511 | IEA | rhythmic process |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000361786
|
CIPC-001 | protein_coding | Homo_sapiens | 0 | 1432 |
|
ENST00000554447
|
CIPC-007 | protein_coding | Homo_sapiens | 0 | 488 |
|
ENST00000554658
|
CIPC-005 | protein_coding | Homo_sapiens | 0 | 433 |
|
ENST00000555200
|
CIPC-008 | protein_coding | Homo_sapiens | 0 | 455 |
|
ENST00000555437
|
CIPC-002 | protein_coding | Homo_sapiens | 0 | 198 |
|
ENST00000555611
|
CIPC-004 | protein_coding | Homo_sapiens | 9.99995e-41 | 171 |
|
ENST00000557115
|
CIPC-006 | protein_coding | Homo_sapiens | 0 | 516 |
