C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: CLOCK-interacting pacemaker
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000554658 CIPC-005 ENSG00000198894 9606 + 14:77098312-77113522 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VF CIL_0007VF_0001 VISTA 14:76618298-77221354
CIL_0008WP CIL_0008WP_0001 VISTA 14:76629854-77233554
CIL_000867 CIL_000867_0001 VISTA 14:76636452-77239164
CIL_0007VT CIL_0007VT_0001 VISTA 14:76740528-77345010
CIL_0003P0 CIL_0003P0_0001 CGP 14:77024543-77117287

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000038369 Cipc-201 protein_coding Mus_musculus 0 433
ENSMUST00000191463 Cipc-009 protein_coding Mus_musculus 0 433
ENSMUST00000187814 Cipc-001 protein_coding Mus_musculus 0 433
ENSMUST00000189246 Cipc-004 protein_coding Mus_musculus 0 433
ENSMUST00000190588 Cipc-007 nonsense_mediated_decay Mus_musculus 0 313
ENSMUST00000191032 Cipc-003 nonsense_mediated_decay Mus_musculus 0 313
ENSMUST00000185434 Cipc-002 nonsense_mediated_decay Mus_musculus 0 313

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