C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DnaJ (Hsp40) homolog, subfamily B, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000188290 Dnajb2-003 ENSMUSG00000026203 10090 + 1:75236487-75245690 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000188290
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000188290 5.974±2.19 6.751±0.11 5.624±0.00 9.290±0.68 6.100±0.40 15.529±2.03 7.387±1.42 9.652±3.62 7.959±0.58 15.549±1.81 9.079±1.04 5.716±2.11 69.156±25.67

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000916 CIL_000916_0002 VISTA 1:75047166-75647630
CIL_0006NW CIL_0006NW_0002 CGP 1:75236406-75264502

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000502 IEA proteasome complex
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005829 IEA cytosol
GO:0008285 ISS negative regulation of cell proliferation
GO:0016234 IEA inclusion body
GO:0030308 ISS negative regulation of cell growth
GO:0030433 IEA ER-associated ubiquitin-dependent protein catabolic process
GO:0030544 IEA Hsp70 protein binding
GO:0031398 IEA positive regulation of protein ubiquitination
GO:0031593 IEA polyubiquitin binding
GO:0032436 IEA positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0042026 IEA protein refolding
GO:0051082 IEA unfolded protein binding
GO:0051087 IEA chaperone binding
GO:0070628 IEA proteasome binding
GO:0090084 IEA negative regulation of inclusion body assembly
GO:0090086 IEA negative regulation of protein deubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000336576 DNAJB2-001 protein_coding Homo_sapiens 0 966
ENST00000392086 DNAJB2-002 protein_coding Homo_sapiens 0 1122
ENST00000392087 DNAJB2-019 protein_coding Homo_sapiens 0 440
ENST00000425450 DNAJB2-008 protein_coding Homo_sapiens 0 845
ENST00000463463 DNAJB2-015 processed_transcript Homo_sapiens 0 835
ENST00000472019 DNAJB2-007 retained_intron Homo_sapiens 0 667
ENST00000473750 DNAJB2-006 retained_intron Homo_sapiens 0 512
ENST00000476254 DNAJB2-017 retained_intron Homo_sapiens 0 440
ENST00000477917 DNAJB2-005 retained_intron Homo_sapiens 0 292

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