C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DnaJ (Hsp40) homolog, subfamily B, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000336576 DNAJB2-001 ENSG00000135924 9606 + 2:219279267-219286900 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000336576
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000336576 5.917±0.00 5.624±0.00 2.053±0.00 15.124±8.06 4.136±3.49 3.708±0.00 5.348±0.00 1.403±0.21 7.666±0.00 4.096±0.00 12.177±5.27 5.879±1.27 11.933±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000916 CIL_000916_0001 VISTA 2:219106772-219707284
CIL_0006NW CIL_0006NW_0001 CGP 2:219279267-219309648

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000502 IDA proteasome complex
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005829 IDA cytosol
GO:0006457 TAS protein folding
GO:0006986 TAS response to unfolded protein
GO:0008219 IEA cell death
GO:0008285 IGI negative regulation of cell proliferation
GO:0016234 IDA inclusion body
GO:0030308 IGI negative regulation of cell growth
GO:0030433 IDA ER-associated ubiquitin-dependent protein catabolic process
GO:0030544 IPI Hsp70 protein binding
GO:0031398 IDA positive regulation of protein ubiquitination
GO:0031593 IDA polyubiquitin binding
GO:0032436 IDA positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0042026 IDA protein refolding
GO:0051082 IDA unfolded protein binding
GO:0051087 IPI chaperone binding
GO:0070628 IDA proteasome binding
GO:0090084 IDA negative regulation of inclusion body assembly
GO:0090086 IDA negative regulation of protein deubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000188931 Dnajb2-001 protein_coding Mus_musculus 0 1559
ENSMUST00000188290 Dnajb2-003 protein_coding Mus_musculus 0 966
ENSMUST00000082158 Dnajb2-202 protein_coding Mus_musculus 0 942
ENSMUST00000188346 Dnajb2-002 protein_coding Mus_musculus 0 942
ENSMUST00000185403 Dnajb2-010 nonsense_mediated_decay Mus_musculus 0 710
ENSMUST00000055223 Dnajb2-201 protein_coding Mus_musculus 0 640
ENSMUST00000187058 Dnajb2-004 protein_coding Mus_musculus 0 640
ENSMUST00000190445 Dnajb2-012 nonsense_mediated_decay Mus_musculus 0 287

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