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C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0006NW_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000135924-ENSG00000054356 | CGP | 9606 | 2:219279267-219309648  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000054356  (PTPRN)protein tyrosine phosphatase, receptor type, N |
ENST00000295718 (PTPRN-001)
|
219289623-219309573 | protein_coding | |
|
ENST00000409251 (PTPRN-003)
|
219289623-219309498 | protein_coding | ||
|
ENST00000412847 (PTPRN-012)
|
219302485-219309009 | protein_coding | ||
|
ENST00000423636 (PTPRN-021)
|
219289841-219308984 | protein_coding | ||
|
ENST00000440552 (PTPRN-011)
|
219302618-219309173 | protein_coding | ||
|
ENST00000442029 (PTPRN-013)
|
219302685-219309007 | protein_coding | ||
|
ENST00000443981 (PTPRN-020)
|
219289649-219296341 | protein_coding | ||
|
ENST00000446182 (PTPRN-008)
|
219302487-219309648 | protein_coding | ||
|
ENST00000451506 (PTPRN-009)
|
219302744-219309538 | protein_coding | ||
|
ENST00000460801 (PTPRN-007)
|
219289625-219292896 | retained_intron | ||
|
ENST00000462351 (PTPRN-006)
|
219289625-219308197 | retained_intron | ||
|
ENST00000468454 (PTPRN-014)
|
219307018-219308923 | processed_transcript | ||
|
ENST00000476930 (PTPRN-016)
|
219302663-219304141 | retained_intron | ||
|
ENST00000477819 (PTPRN-015)
|
219307528-219308340 | retained_intron | ||
|
ENST00000484986 (PTPRN-010)
|
219307483-219309402 | retained_intron | ||
|
ENST00000486480 (PTPRN-017)
|
219297423-219299572 | retained_intron | ||
|
ENST00000489650 (PTPRN-018)
|
219297979-219299492 | retained_intron | ||
|
ENST00000497977 (PTPRN-019)
|
219290052-219296758 | processed_transcript | ||
|
ENST00000606213 (PTPRN-005)
|
219302768-219309381 | nonsense_mediated_decay | ||
|
ENSG00000135924 (DNAJB2) DnaJ (Hsp40) homolog, subfamily B, member 2 |
ENST00000336576 (DNAJB2-001)
|
219279267-219286900 | protein_coding | |
|
ENST00000392086 (DNAJB2-002)
|
219279344-219286898 | protein_coding | ||
|
ENST00000392087 (DNAJB2-019)
|
219279465-219284838 | protein_coding | ||
|
ENST00000421532 (DNAJB2-009)
|
219279366-219282105 | protein_coding | ||
|
ENST00000425450 (DNAJB2-008)
|
219279342-219284696 | protein_coding | ||
|
ENST00000439026 (DNAJB2-012)
|
219279517-219282929 | protein_coding | ||
|
ENST00000442681 (DNAJB2-011)
|
219279516-219282852 | protein_coding | ||
|
ENST00000463463 (DNAJB2-015)
|
219279920-219284828 | processed_transcript | ||
|
ENST00000470530 (DNAJB2-018)
|
219285263-219286200 | processed_transcript | ||
|
ENST00000472019 (DNAJB2-007)
|
219282742-219286839 | retained_intron | ||
|
ENST00000473750 (DNAJB2-006)
|
219282698-219285196 | retained_intron | ||
|
ENST00000476254 (DNAJB2-017)
|
219283064-219284874 | retained_intron | ||
|
ENST00000477917 (DNAJB2-005)
|
219279367-219286895 | retained_intron | ||
|
ENST00000480537 (DNAJB2-003)
|
219279367-219282660 | retained_intron | ||
|
ENST00000481815 (DNAJB2-013)
|
219279588-219280693 | retained_intron | ||
|
ENST00000482988 (DNAJB2-010)
|
219279369-219280170 | retained_intron | ||
|
ENST00000485220 (DNAJB2-014)
|
219279906-219281373 | retained_intron | ||
|
ENST00000487855 (DNAJB2-016)
|
219280613-219282665 | processed_transcript | ||
|
Genome Exciting message Genes Connecting Transcripts Connecting Powered by Dalliance 0.11.11 |
| CIL_0006NW_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000026203-ENSMUSG00000026204 | CGP | 10090 | 1:75236406-75264502 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000026203 (Dnajb2) DnaJ (Hsp40) homolog, subfamily B, member 2 |
ENSMUST00000055223 (Dnajb2-201)
|
75236465-75244804 | protein_coding | |
|
ENSMUST00000082158 (Dnajb2-202)
|
75236465-75244804 | protein_coding | ||
|
ENSMUST00000185403 (Dnajb2-010)
|
75236513-75245055 | nonsense_mediated_decay | ||
|
ENSMUST00000185654 (Dnajb2-007)
|
75236614-75239333 | protein_coding | ||
|
ENSMUST00000186600 (Dnajb2-008)
|
75236772-75237681 | retained_intron | ||
|
ENSMUST00000187058 (Dnajb2-004)
|
75236556-75245690 | protein_coding | ||
|
ENSMUST00000188290 (Dnajb2-003)
|
75236487-75245690 | protein_coding | ||
|
ENSMUST00000188346 (Dnajb2-002)
|
75236469-75245692 | protein_coding | ||
|
ENSMUST00000188628 (Dnajb2-009)
|
75237075-75237524 | retained_intron | ||
|
ENSMUST00000188931 (Dnajb2-001)
|
75236406-75245688 | protein_coding | ||
|
ENSMUST00000190379 (Dnajb2-011)
|
75238924-75240921 | retained_intron | ||
|
ENSMUST00000190445 (Dnajb2-012)
|
75241409-75244927 | nonsense_mediated_decay | ||
|
ENSMUSG00000026204 (Ptprn) protein tyrosine phosphatase, receptor type, N |
ENSMUST00000027404 (Ptprn-001)
|
75247027-75264213 | protein_coding | |
|
ENSMUST00000185849 (Ptprn-003)
|
75258559-75264502 | protein_coding | ||
|
ENSMUST00000186178 (Ptprn-005)
|
75258491-75263907 | protein_coding | ||
|
ENSMUST00000187216 (Ptprn-007)
|
75256858-75257997 | retained_intron | ||
|
ENSMUST00000188401 (Ptprn-006)
|
75258583-75264208 | processed_transcript | ||
|
ENSMUST00000189769 (Ptprn-004)
|
75258491-75264050 | protein_coding | ||
|
ENSMUSG00000101840 (RP23-321N22.11) predicted gene 28294 |
ENSMUST00000191154 (RP23-321N22.11-001)
|
75252322-75257427 | antisense | |
|
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Expression Patterns
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