C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neurofascin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000188307 Nfasc-002 ENSMUSG00000026442 10090 - 1:132599835-132741797 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000188307
Transcript ID Adipose Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000188307 0.060±0.00 0.188±0.00 0.121±0.00 0.037±0.01 0.037±0.03 0.076±0.02 0.081±0.01 0.014±0.00 0.055±0.04

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000339876 NFASC-201 protein_coding Homo_sapiens 0 3038
ENST00000360049 NFASC-202 protein_coding Homo_sapiens 0 1452
ENST00000367173 NFASC-006 protein_coding Homo_sapiens 0 2996
ENST00000401399 NFASC-001 protein_coding Homo_sapiens 0 3038
ENST00000403080 NFASC-003 protein_coding Homo_sapiens 0 2228
ENST00000404076 NFASC-012 protein_coding Homo_sapiens 0 2300
ENST00000404907 NFASC-010 protein_coding Homo_sapiens 0 1452
ENST00000404977 NFASC-002 processed_transcript Homo_sapiens 0 2261
ENST00000425360 NFASC-004 protein_coding Homo_sapiens 0 219
ENST00000430393 NFASC-011 protein_coding Homo_sapiens 0 2449
ENST00000468328 NFASC-015 processed_transcript Homo_sapiens 1.4013e-45 185
ENST00000471392 NFASC-016 processed_transcript Homo_sapiens 0 782
ENST00000504149 NFASC-025 processed_transcript Homo_sapiens 0 381
ENST00000504476 NFASC-021 nonsense_mediated_decay Homo_sapiens 0 1602
ENST00000512826 NFASC-022 retained_intron Homo_sapiens 0 1637
ENST00000513543 NFASC-018 protein_coding Homo_sapiens 0 1452
ENST00000514644 NFASC-020 retained_intron Homo_sapiens 0 854
ENST00000539706 NFASC-203 protein_coding Homo_sapiens 0 1452

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