C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier organic anion transporter family, member 2a1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000188664 Slco2a1-002 ENSMUSG00000032548 10090 + 9:103008499-103096002 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000188664
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000188664 1.844±0.79 1.696±0.19 10.500±2.35 12.175±3.11 0.609±0.12 3.469±0.92 6.291±2.40 59.747±17.50 15.702±2.62 26.785±27.97 0.454±0.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00019J CIL_00019J_0002 CGP 9:102834917-103096002
CIL_0005UG CIL_0005UG_0002 CGP 9:102988712-103185276

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005887 IC integral component of plasma membrane
GO:0015132 IDA prostaglandin transmembrane transporter activity
GO:0015732 IDA prostaglandin transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000310926 SLCO2A1-001 protein_coding Homo_sapiens 0 1090
ENST00000462770 SLCO2A1-003 retained_intron Homo_sapiens 0 399
ENST00000464676 SLCO2A1-002 retained_intron Homo_sapiens 0 765
ENST00000478651 SLCO2A1-005 processed_transcript Homo_sapiens 0 399
ENST00000481359 SLCO2A1-007 nonsense_mediated_decay Homo_sapiens 0 1777
ENST00000493729 SLCO2A1-004 protein_coding Homo_sapiens 0 688

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