C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: telomeric repeat binding factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000188684 Terf1-003 ENSMUSG00000025925 10090 + 1:15807641-15822103 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastENSMUST00000188684
Transcript ID Brain Breast
ENSMUST00000188684 0.227±0.00 0.083±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003GB CIL_0003GB_0002 CGP 1:15287254-15844052
CIL_000132 CIL_000132_0002 CGP 1:15805646-15892722

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000276602 TERF1-002 protein_coding Homo_sapiens 0 532
ENST00000276603 TERF1-001 protein_coding Homo_sapiens 0 532
ENST00000311003 TERF1P1-001 processed_pseudogene Homo_sapiens 0 501
ENST00000399580 TERF1P4-001 processed_pseudogene Homo_sapiens 0 501
ENST00000432946 RP11-311P8.2-001 processed_pseudogene Homo_sapiens 0 510
ENST00000477545 TERF1P5-001 processed_pseudogene Homo_sapiens 0 516
ENST00000505638 TERF1P3-001 processed_pseudogene Homo_sapiens 0 494
ENST00000517390 TERF1-006 protein_coding Homo_sapiens 0 532
ENST00000518874 TERF1-005 protein_coding Homo_sapiens 0 265

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