C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000132_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000147601-ENSG00000164764 CGP 9606 8:73008864-73124088
GeneTranscriptPositionBiotype
ENSG00000147601 (TERF1)
telomeric repeat binding factor (NIMA-interacting) 1 		ENST00000276602 (TERF1-002) 73008864-73048122 protein_coding
ENST00000276603 (TERF1-001) 73008864-73046471 protein_coding
ENST00000517390 (TERF1-006) 73012857-73027036 protein_coding
ENST00000518695 (TERF1-004) 73008908-73012505 retained_intron
ENST00000518874 (TERF1-005) 73008877-73022280 protein_coding
ENST00000518961 (TERF1-003) 73029953-73046975 retained_intron
ENST00000520783 (TERF1-008) 73031613-73038804 processed_transcript
ENST00000522018 (TERF1-007) 73022233-73038798 processed_transcript
ENSG00000164764 (SBSPON)
somatomedin B and thrombospondin, type 1 domain containing 		ENST00000297354 (SBSPON-001) 73064540-73093272 protein_coding
ENST00000519697 (SBSPON-002) 73066532-73124088 processed_transcript
ENSG00000237061 (RP11-956J14.1)
 ENST00000442274 (RP11-956J14.1-001) 73083787-73085879 sense_intronic
ENSG00000253636 (RP11-531A24.5)
 ENST00000517664 (RP11-531A24.5-001) 73052178-73063061 antisense
ENSG00000272254 (RP11-531A24.7)
 ENST00000607665 (RP11-531A24.7-001) 73042910-73043346 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_000132_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025925-ENSMUSG00000032719 CGP 10090 1:15805646-15892722
GeneTranscriptPositionBiotype
ENSMUSG00000025925 (Terf1)
telomeric repeat binding factor 1 		ENSMUST00000027057 (Terf1-002) 15805664-15843470 protein_coding
ENSMUST00000186565 (Terf1-004) 15805657-15822015 processed_transcript
ENSMUST00000188371 (Terf1-001) 15805646-15844052 protein_coding
ENSMUST00000188684 (Terf1-003) 15807641-15822103 retained_intron
ENSMUSG00000032719 (Sbspon)
somatomedin B and thrombospondin, type 1 domain containing 		ENSMUST00000040695 (Sbspon-001) 15853862-15892722 protein_coding
ENSMUSG00000088943 (Gm23259)
predicted gene, 23259 		ENSMUST00000158318 (Gm23259-201) 15879530-15879832 misc_RNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000132_0001ENSG00000147601ENST00000276602ENST00000276603ENST00000517390ENST00000518695ENST00000518874ENST00000518961ENST00000520783ENST00000522018ENSG00000164764ENST00000297354ENST00000519697ENSG00000237061ENST00000442274ENSG00000253636ENST00000517664ENSG00000272254ENST00000607665CIL_000132_0002ENSMUSG00000025925ENSMUST00000027057ENSMUST00000186565ENSMUST00000188371ENSMUST00000188684ENSMUSG00000032719ENSMUST00000040695ENSMUSG00000088943ENSMUST00000158318
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000132_0001ENSG00000147601ENST00000276602ENST00000276603ENST00000517390ENST00000518695ENST00000518961ENST00000522018ENSG00000164764ENST00000297354ENST00000519697ENSG00000237061ENST00000442274ENSG00000253636ENST00000517664ENSG00000272254ENST00000607665CIL_000132_0002ENSMUSG00000025925ENSMUST00000027057ENSMUST00000186565ENSMUST00000188371ENSMUST00000188684ENSMUSG00000032719ENSMUST00000040695ENSMUSG00000088943ENSMUST00000158318
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000147601 ENST00000276602 N/A 2.802±0.00 N/A 0.740±0.00 0.896±0.00 1.440±1.08 0.269±0.00 N/A 0.408±0.08 1.666±0.15 0.504±0.42 2.358±1.01 2.234±0.45 3.721±0.00
ENST00000276603 1.865±0.00 2.482±0.00 N/A 2.398±0.38 2.117±0.80 3.971±0.00 0.773±0.45 3.808±0.00 1.739±0.70 1.476±0.19 0.281±0.00 3.310±1.87 2.527±0.28 5.391±2.25
ENST00000517390 N/A N/A N/A N/A N/A 1.904±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518695 N/A N/A 0.501±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518874 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518961 N/A 0.598±0.00 0.275±0.00 N/A 0.483±0.00 0.312±0.00 0.228±0.00 0.505±0.00 N/A 0.433±0.00 N/A 0.616±0.03 N/A 1.659±0.00
ENST00000520783 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522018 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.014±0.00
ENSG00000164764 ENST00000297354 0.889±0.00 4.891±0.00 0.243±0.00 0.070±0.00 0.261±0.00 0.803±0.58 0.207±0.10 2.401±2.31 3.427±3.40 1.942±0.00 0.154±0.14 1.617±1.87 1.350±0.59 1.112±0.59
ENST00000519697 N/A N/A N/A N/A 0.654±0.00 0.842±0.44 N/A 3.666±0.00 N/A 1.247±0.00 0.083±0.07 0.084±0.00 2.765±1.76 5.003±0.46
ENSG00000237061 ENST00000442274 N/A 0.286±0.00 0.336±0.00 N/A N/A 0.026±0.00 N/A 0.510±0.00 0.025±0.00 0.026±0.00 N/A 0.304±0.00 0.051±0.00 0.195±0.09
ENSG00000253636 ENST00000517664 0.154±0.00 N/A 0.691±0.00 0.243±0.03 0.629±0.38 0.281±0.10 0.084±0.03 0.172±0.00 0.088±0.00 0.459±0.33 0.166±0.08 0.142±0.01 0.205±0.24 0.302±0.00
ENSG00000272254 ENST00000607665 N/A 0.356±0.00 N/A 0.124±0.00 0.403±0.33 0.036±0.00 N/A 0.040±0.00 N/A N/A N/A 0.481±0.07 N/A 0.115±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025925 ENSMUST00000027057 0.533±0.11 0.949±0.41 2.789±0.01 4.645±3.61 0.319±0.14 0.466±0.08 0.334±0.00 0.959±0.28 4.762±4.21 0.958±0.19 0.855±0.14 10.585±10.22 17.403±16.23 12.774±20.11
ENSMUST00000186565 2.396±0.99 3.272±1.12 1.437±0.00 1.593±0.10 3.021±2.30 3.903±0.88 0.941±0.24 2.258±0.56 3.129±2.15 5.192±1.01 0.442±0.18 5.516±2.22 4.437±0.02 4.757±0.47
ENSMUST00000188371 N/A N/A 0.645±0.01 N/A 0.598±0.00 0.409±0.11 0.206±0.00 0.292±0.00 1.190±0.43 0.936±0.28 0.390±0.05 0.850±0.22 1.333±0.39 N/A
ENSMUST00000188684 N/A N/A N/A 0.227±0.00 0.083±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000032719 ENSMUST00000040695 1.596±1.51 8.345±2.86 0.644±0.17 0.115±0.00 1.879±0.57 1.412±0.55 0.227±0.17 1.687±0.43 0.061±0.04 2.510±0.31 0.165±0.06 4.884±2.57 0.060±0.06 0.033±0.02
ENSMUSG00000088943 ENSMUST00000158318 N/A N/A 0.059±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.710±0.00 N/A N/A

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