C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: protein tyrosine phosphatase, non-receptor type 18
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000190122 Ptpn18-004 ENSMUSG00000026126 10090 + 1:34459777-34471917 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaENSMUST00000190122
Transcript ID Placenta
ENSMUST00000190122 0.696±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001J6 CIL_0001J6_0002 CGP 1:34439851-34475733

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000175756 PTPN18-001 protein_coding Homo_sapiens 0 787
ENST00000347849 PTPN18-002 protein_coding Homo_sapiens 0 507
ENST00000409022 PTPN18-003 protein_coding Homo_sapiens 0 335
ENST00000428843 PTPN18-006 nonsense_mediated_decay Homo_sapiens 0 556
ENST00000462996 PTPN18-011 retained_intron Homo_sapiens 0 235
ENST00000464576 PTPN18-015 retained_intron Homo_sapiens 1e-32 143
ENST00000483617 PTPN18-007 retained_intron Homo_sapiens 0 278
ENST00000489215 PTPN18-005 retained_intron Homo_sapiens 0 278
ENST00000490137 PTPN18-016 retained_intron Homo_sapiens 7e-21 104
ENST00000490812 PTPN18-010 retained_intron Homo_sapiens 2.00386e-43 180
ENST00000495400 PTPN18-009 retained_intron Homo_sapiens 0 307

Loading