C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 7114
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000190159 RP23-75G11.2-001 ENSMUSG00000100481 10090 + 1:33100907-33102695 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverLungOvaryPlacentaENSMUST00000190159
Transcript ID Bladder Brain Liver Lung Ovary Placenta
ENSMUST00000190159 0.164±0.03 0.058±0.03 0.163±0.03 0.035±0.01 0.015±0.00 0.065±0.06

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000329331 SETD3-003 protein_coding Homo_sapiens 0 1068
ENST00000331768 SETD3-001 protein_coding Homo_sapiens 0 1912
ENST00000357563 SETD3-004 nonsense_mediated_decay Homo_sapiens 0 597
ENST00000436070 SETD3-002 protein_coding Homo_sapiens 0 1066
ENST00000446066 SETD3-005 nonsense_mediated_decay Homo_sapiens 0 848
ENST00000453764 SETD3-008 nonsense_mediated_decay Homo_sapiens 0 769
ENST00000453938 SETD3-007 processed_transcript Homo_sapiens 0 357
ENST00000489770 SETD3-006 retained_intron Homo_sapiens 0 455

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