C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | SET domain containing 3 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000436070  |
SETD3-002 |
ENSG00000183576 |
9606 | - |
14:99411279-99480790  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007KT | CIL_0007KT_0001 | UCNEbase | 14:98137606-99417500 |
| CIL_0005H1 | CIL_0005H1_0001 | CGP | 14:99169287-99480879 |
| CIL_0009CK | CIL_0009CK_0001 | VISTA | 14:99273315-99877989 |
| CIL_0003HD | CIL_0003HD_0001 | CGP | 14:99397746-99535044 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003713 | IEA | transcription coactivator activity |
| GO:0005515 | IEA | protein binding |
| GO:0010452 | IEA | histone H3-K36 methylation |
| GO:0018022 | IEA | peptidyl-lysine methylation |
| GO:0046975 | IEA | histone methyltransferase activity (H3-K36 specific) |
| GO:2001141 | IEA | regulation of RNA biosynthetic process |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000109879
|
Setd3-007 | protein_coding | Mus_musculus | 0 | 1256 |
|
ENSMUST00000071095
|
Setd3-001 | protein_coding | Mus_musculus | 0 | 1240 |
|
ENSMUST00000190159
|
RP23-75G11.2-001 | processed_pseudogene | Mus_musculus | 0 | 1066 |
|
ENSMUST00000120625
|
Gm14026-001 | processed_pseudogene | Mus_musculus | 0 | 1027 |
|
ENSMUST00000118089
|
Gm8036-001 | processed_pseudogene | Mus_musculus | 0 | 987 |
|
ENSMUST00000147466
|
Setd3-003 | nonsense_mediated_decay | Mus_musculus | 0 | 704 |
|
ENSMUST00000125916
|
Setd3-005 | protein_coding | Mus_musculus | 0 | 656 |
|
ENSMUST00000132682
|
Setd3-002 | nonsense_mediated_decay | Mus_musculus | 0 | 451 |
|
ENSMUST00000169951
|
Setd3-008 | processed_transcript | Mus_musculus | 7.00649e-43 | 180 |
