C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CLIP associating protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000190571 Clasp1-001 ENSMUSG00000064302 10090 + 1:118419724-118608492 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001VI CIL_0001VI_0002 CGP 1:118321839-118612678
CIL_0001QO CIL_0001QO_0002 CGP 1:118389058-118685168

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000226 IEA microtubule cytoskeleton organization
GO:0000776 IEA kinetochore
GO:0001578 IEA microtubule bundle formation
GO:0005794 IEA Golgi apparatus
GO:0005813 IEA centrosome
GO:0005876 IEA spindle microtubule
GO:0005938 IEA cell cortex
GO:0007020 IEA microtubule nucleation
GO:0007026 IEA negative regulation of microtubule depolymerization
GO:0008017 IEA microtubule binding
GO:0010458 IEA exit from mitosis
GO:0016020 IEA membrane
GO:0030981 IEA cortical microtubule cytoskeleton
GO:0031023 IEA microtubule organizing center organization
GO:0031111 IEA negative regulation of microtubule polymerization or depolymerization
GO:0031592 IEA centrosomal corona
GO:0034453 IEA microtubule anchoring
GO:0051294 IEA establishment of spindle orientation
GO:0051301 IEA cell division
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263710 CLASP1-201 protein_coding Homo_sapiens 0 5781
ENST00000397587 CLASP1-202 protein_coding Homo_sapiens 0 2811
ENST00000409078 CLASP1-001 protein_coding Homo_sapiens 0 2673
ENST00000418989 CLASP1-012 protein_coding Homo_sapiens 0 617
ENST00000430234 CLASP1-014 processed_transcript Homo_sapiens 0 675
ENST00000452274 CLASP1-016 nonsense_mediated_decay Homo_sapiens 0 1790
ENST00000455322 CLASP1-203 protein_coding Homo_sapiens 0 2811
ENST00000463621 CLASP1-003 retained_intron Homo_sapiens 0 283
ENST00000472776 CLASP1-004 retained_intron Homo_sapiens 0 654
ENST00000474065 CLASP1-010 retained_intron Homo_sapiens 0 562
ENST00000485112 CLASP1-009 retained_intron Homo_sapiens 0 612
ENST00000491646 CLASP1-015 retained_intron Homo_sapiens 0 342
ENST00000541377 CLASP1-204 protein_coding Homo_sapiens 0 2531

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