C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytoplasmic linker associated protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000455322 CLASP1-203 ENSG00000074054 9606 - 2:121339990-121649438 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartLiverLungMuscleOvaryTestisENST00000455322
Transcript ID Brain Breast Colon Heart Liver Lung Muscle Ovary Testis
ENST00000455322 3.393±0.00 3.876±0.00 2.953±0.00 4.045±0.00 3.154±0.00 2.104±0.00 2.059±0.00 2.834±0.94 2.273±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007TZ CIL_0007TZ_0001 VISTA 2:120774842-121375741

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005515 IEA protein binding
GO:0005828 IEA kinetochore microtubule
GO:0005881 IEA cytoplasmic microtubule
GO:0043515 IEA kinetochore binding
GO:0051010 IEA microtubule plus-end binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000185405 Clasp1-009 protein_coding Mus_musculus 0 6111
ENSMUST00000191445 Clasp1-005 protein_coding Mus_musculus 0 5960
ENSMUST00000178710 Clasp1-204 protein_coding Mus_musculus 0 5829
ENSMUST00000187713 Clasp1-010 protein_coding Mus_musculus 0 5819
ENSMUST00000189738 Clasp1-007 protein_coding Mus_musculus 0 5747
ENSMUST00000189570 Clasp1-004 protein_coding Mus_musculus 0 5694
ENSMUST00000165223 Clasp1-203 protein_coding Mus_musculus 0 5683
ENSMUST00000189262 Clasp1-003 protein_coding Mus_musculus 0 5677
ENSMUST00000190733 Clasp1-008 nonsense_mediated_decay Mus_musculus 0 4394
ENSMUST00000070989 Clasp1-202 protein_coding Mus_musculus 0 3099
ENSMUST00000049404 Clasp1-201 protein_coding Mus_musculus 0 3099
ENSMUST00000188710 Clasp1-013 protein_coding Mus_musculus 0 2883
ENSMUST00000186349 Clasp1-011 protein_coding Mus_musculus 0 2843
ENSMUST00000190571 Clasp1-001 protein_coding Mus_musculus 0 2811
ENSMUST00000190135 Clasp1-006 retained_intron Mus_musculus 0 2351
ENSMUST00000189676 Clasp1-002 retained_intron Mus_musculus 0 1956
ENSDART00000102445 clasp1a-201 protein_coding Danio_rerio 0 632
ENSDART00000137955 clasp1a-001 protein_coding Danio_rerio 0 508
ENSMUST00000187575 Clasp1-015 retained_intron Mus_musculus 0 222
ENSMUST00000189216 Clasp1-016 retained_intron Mus_musculus 3e-40 172

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