C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: retinoblastoma binding protein 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000190997 Rbbp5-002 ENSMUSG00000026439 10090 + 1:132477367-132504889 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000190997
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000190997 3.191±1.22 1.834±0.74 2.665±0.21 2.635±0.21 2.262±0.75 1.829±0.98 1.925±0.87 1.755±0.61 2.925±1.34 2.151±0.28 2.803±0.53 3.159±1.68 4.423±1.85

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 ISO nucleus
GO:0005730 IEA nucleolus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006974 ISO cellular response to DNA damage stimulus
GO:0035064 IEA methylated histone binding
GO:0035097 ISO histone methyltransferase complex
GO:0042800 IEA histone methyltransferase activity (H3-K4 specific)
GO:0043627 IEA response to estrogen
GO:0044212 IEA transcription regulatory region DNA binding
GO:0048188 ISS Set1C/COMPASS complex
GO:0051568 IMP histone H3-K4 methylation
GO:0071339 ISS MLL1 complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264515 RBBP5-001 protein_coding Homo_sapiens 0 2846
ENST00000367164 RBBP5-002 protein_coding Homo_sapiens 0 2231
ENST00000484379 RBBP5-003 processed_transcript Homo_sapiens 0 350

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