C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transcription factor AP-2 delta (activating enhancer binding protein 2 delta)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000008391 TFAP2D-001 ENSG00000008197 9606 + 6:50713828-50772988 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryENST00000008391
Transcript ID Brain Ovary
ENST00000008391 0.104±0.00 0.021±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007MC CIL_0007MC_0001 UCNEbase 6:50093187-51124665
CIL_000813 CIL_000813_0001 VISTA 6:50284539-50886680
CIL_00096L CIL_00096L_0001 VISTA 6:50417531-51018524
CIL_0005MY CIL_0005MY_0001 CGP 6:50713828-50847613

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000977 IEA RNA polymerase II regulatory region sequence-specific DNA binding
GO:0000981 IEA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005667 IEA transcription factor complex
GO:0006366 IEA transcription from RNA polymerase II promoter
GO:0043524 IEA negative regulation of neuron apoptotic process
GO:0045893 IEA positive regulation of transcription, DNA-templated
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0061379 IEA inferior colliculus development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000037294 Tfap2d-001 protein_coding Mus_musculus 0 2519
ENSDART00000031167 tfap2d-001 protein_coding Danio_rerio 0 837
ENSMUST00000149505 Tfap2d-002 processed_transcript Mus_musculus 0 712

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