C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: replication termination factor 2 domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000023939 RTFDC1-201 ENSG00000022277 9606 + 20:56468585-56518886 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000023939
Transcript ID Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000023939 8.368±0.00 9.077±0.00 6.743±0.00 12.260±0.00 12.478±10.60 12.523±0.00 19.836±0.00 18.847±0.00 29.347±1.09 29.903±2.79 10.218±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099D CIL_00099D_0001 VISTA 20:56155251-56756351
CIL_00036G CIL_00036G_0001 CGP 20:56412112-56519449
CIL_00015M CIL_00015M_0002 CGP 20:56468585-56525925

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029005 Rtfdc1-001 protein_coding Mus_musculus 0 822
ENSMUST00000109132 Rtfdc1-003 retained_intron Mus_musculus 0 664
ENSMUST00000140048 Rtfdc1-002 processed_transcript Mus_musculus 0 381

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