C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: replication termination factor 2 domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000029005 Rtfdc1-001 ENSMUSG00000027502 10090 + 2:172440556-172469908 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029005
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029005 38.896±9.78 20.871±2.48 32.199±3.08 20.162±6.76 33.322±4.47 19.649±1.72 10.670±0.70 19.469±0.52 20.532±2.39 26.465±0.94 17.738±1.04 24.496±5.49 30.924±11.87 11.855±0.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099D CIL_00099D_0002 VISTA 2:172130534-172731364
CIL_00036G CIL_00036G_0002 CGP 2:172393794-172469908
CIL_00015M CIL_00015M_0003 CGP 2:172440556-172469908

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000023939 RTFDC1-201 protein_coding Homo_sapiens 0 822
ENST00000357348 RTFDC1-001 protein_coding Homo_sapiens 0 918
ENST00000395881 RTFDC1-004 protein_coding Homo_sapiens 0 688
ENST00000449062 RTFDC1-006 protein_coding Homo_sapiens 0 664

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