C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: serine/threonine kinase receptor associated protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000025399 STRAP-002 ENSG00000023734 9606 + 12:15882394-15903014 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaTestisENST00000025399
Transcript ID Ovary Placenta Testis
ENST00000025399 80.513±0.00 29.629±0.00 31.313±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007F9 CIL_0007F9_0001 CGP 12:15620158-15903478
CIL_000896 CIL_000896_0001 VISTA 12:15717656-16318890
CIL_0005FF CIL_0005FF_0001 CGP 12:15882391-16037282

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0016301 IEA kinase activity
GO:0016310 IEA phosphorylation
GO:0030054 IDA cell junction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000064910 Strap-001 protein_coding Mus_musculus 0 1269
ENSMUST00000122047 Gm12570-001 processed_pseudogene Mus_musculus 0 749
ENSMUST00000137235 Strap-003 processed_transcript Mus_musculus 1e-32 145

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