C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005FF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000023734-ENSG00000023697 CGP 9606 12:15882391-16037282
GeneTranscriptPositionBiotype
ENSG00000023697 (DERA)
deoxyribose-phosphate aldolase (putative) 		ENST00000428559 (DERA-001) 15911172-16037282 protein_coding
ENST00000524480 (DERA-004) 15911329-15982358 protein_coding
ENST00000526521 (DERA-005) 15911302-16036292 nonsense_mediated_decay
ENST00000526530 (DERA-003) 15956588-16037280 protein_coding
ENST00000528821 (DERA-002) 15911363-16033048 nonsense_mediated_decay
ENST00000530274 (DERA-009) 15962752-16036813 retained_intron
ENST00000531803 (DERA-006) 15911359-16032551 protein_coding
ENST00000532573 (DERA-010) 15985172-16036340 processed_transcript
ENST00000532964 (DERA-007) 15911363-16036751 protein_coding
ENST00000533447 (DERA-008) 15951361-16032657 protein_coding
ENSG00000023734 (STRAP)
serine/threonine kinase receptor associated protein 		ENST00000025399 (STRAP-002) 15882394-15903014 protein_coding
ENST00000419869 (STRAP-001) 15882395-15903478 protein_coding
ENST00000536737 (STRAP-005) 15895454-15898272 retained_intron
ENST00000538718 (STRAP-006) 15897945-15903340 protein_coding
ENST00000539887 (STRAP-007) 15900899-15903478 retained_intron
ENST00000541731 (STRAP-003) 15882391-15903442 nonsense_mediated_decay
ENSG00000256134 (EGLN3P1)
egl-9 family hypoxia-inducible factor 3 pseudogene 1 		ENST00000541727 (EGLN3P1-001) 15971890-15972609 processed_pseudogene
CIL_0005FF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030224-ENSMUSG00000030225 CGP 10090 6:137735078-137837891
GeneTranscriptPositionBiotype
ENSMUSG00000030224 (Strap)
serine/threonine kinase receptor associated protein 		ENSMUST00000064910 (Strap-001) 137735078-137751932 protein_coding
ENSMUST00000137235 (Strap-003) 137749225-137750676 processed_transcript
ENSMUST00000154698 (Strap-002) 137745040-137748753 processed_transcript
ENSMUSG00000030225 (Dera)
2-deoxyribose-5-phosphate aldolase homolog (C. elegans) 		ENSMUST00000087675 (Dera-201) 137754542-137837891 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005FF_0001ENSG00000023697ENST00000428559ENST00000524480ENST00000526521ENST00000526530ENST00000528821ENST00000530274ENST00000531803ENST00000532573ENST00000532964ENST00000533447ENSG00000023734ENST00000025399ENST00000419869ENST00000536737ENST00000538718ENST00000539887ENST00000541731ENSG00000256134ENST00000541727CIL_0005FF_0002ENSMUSG00000030224ENSMUST00000064910ENSMUST00000137235ENSMUST00000154698ENSMUSG00000030225ENSMUST00000087675
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005FF_0001ENSG00000023697ENST00000428559ENST00000526521ENST00000526530ENST00000530274ENST00000531803ENST00000533447ENSG00000023734ENST00000025399ENST00000419869ENST00000538718ENST00000539887ENST00000541731ENSG00000256134ENST00000541727CIL_0005FF_0002ENSMUSG00000030224ENSMUST00000064910ENSMUSG00000030225ENSMUST00000087675
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000023697 ENST00000428559 8.656±0.00 8.684±0.00 N/A 2.602±1.33 8.113±0.00 10.045±0.00 3.785±3.19 24.266±6.07 10.734±0.00 9.290±0.00 4.251±3.09 10.745±3.37 10.171±3.87 5.040±3.75
ENST00000524480 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526521 5.559±0.00 5.854±0.00 N/A 5.027±0.00 N/A 3.479±0.00 N/A N/A N/A N/A 0.849±0.00 17.456±0.00 11.758±0.00 2.466±0.00
ENST00000526530 N/A N/A N/A N/A N/A N/A 1.233±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000528821 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530274 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.327±0.00 8.305±0.00 N/A N/A
ENST00000531803 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 25.247±0.00 9.605±0.00 4.956±0.00
ENST00000532573 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532964 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533447 N/A N/A N/A N/A N/A N/A 0.809±0.00 N/A 4.164±0.00 N/A N/A N/A N/A N/A
ENSG00000023734 ENST00000025399 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 80.513±0.00 29.629±0.00 31.313±0.00
ENST00000419869 45.547±0.00 21.894±0.00 6.060±0.00 27.920±8.17 28.076±15.03 22.394±12.35 22.492±15.05 26.674±16.31 14.683±5.22 21.682±15.69 19.190±9.31 38.843±7.87 33.875±3.16 27.113±8.87
ENST00000536737 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538718 19.345±0.00 16.782±0.00 N/A 19.183±0.00 19.803±0.00 N/A N/A 20.010±0.00 10.549±0.00 N/A 18.638±0.00 39.359±0.00 N/A 27.987±0.00
ENST00000539887 N/A 19.112±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 22.726±0.00 N/A N/A
ENST00000541731 N/A N/A 0.833±0.00 N/A N/A 6.761±0.00 7.892±0.00 N/A N/A N/A N/A 11.456±5.64 N/A N/A
ENSG00000256134 ENST00000541727 N/A 0.071±0.00 N/A N/A 0.214±0.04 N/A 0.088±0.00 0.288±0.00 0.081±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030224 ENSMUST00000064910 22.321±12.99 123.006±21.37 22.626±2.81 29.511±2.74 41.405±27.45 50.435±4.31 19.963±0.67 27.621±7.58 27.444±5.38 35.911±6.99 27.776±6.40 71.177±30.22 35.626±7.20 48.526±22.91
ENSMUST00000137235 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154698 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000030225 ENSMUST00000087675 7.007±2.25 3.697±0.69 5.290±0.50 1.721±0.78 4.976±1.67 10.162±1.29 1.542±0.24 22.130±1.81 23.968±11.23 3.642±0.88 2.598±0.52 5.431±0.89 20.855±10.10 3.193±1.27

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