C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: YTH domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000161863 YTHDC2-001 ENSG00000047188 9606 + 5:113513683-113595284 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000161863
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000161863 2.987±0.00 5.669±0.00 2.849±1.25 2.113±1.18 2.324±0.94 1.337±0.93 1.926±0.52 1.768±0.31 1.987±0.74 1.144±0.15 2.280±1.32 1.400±0.33 5.547±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004UP CIL_0004UP_0001 CGP 5:113513683-114496640

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0004386 IEA helicase activity
GO:0005515 IPI:IEA protein binding
GO:0005524 IEA ATP binding
GO:0005783 IDA endoplasmic reticulum
GO:0006200 IDA ATP catabolic process
GO:0008186 IDA RNA-dependent ATPase activity
GO:0034612 IDA response to tumor necrosis factor
GO:0044822 IDA poly(A) RNA binding
GO:0044829 IMP positive regulation by host of viral genome replication
GO:0070063 IPI RNA polymerase binding
GO:0070555 IDA response to interleukin-1

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000037763 Ythdc2-201 protein_coding Mus_musculus 0 5943

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