C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: translocation associated membrane protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000182527 TRAM2-001 ENSG00000065308 9606 - 6:52497402-52576915 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000182527
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000182527 14.215±0.00 7.864±0.00 1.724±0.00 0.714±0.34 7.101±0.78 5.929±1.86 1.808±0.97 3.346±1.23 6.747±2.56 3.522±0.96 0.878±0.33 5.085±1.87 14.703±1.80 10.458±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081C CIL_00081C_0001 VISTA 6:52088930-52691414
CIL_0005N7 CIL_0005N7_0001 CGP 6:52420308-52576915
CIL_0005N6 CIL_0005N6_0001 CGP 6:52497402-52686588

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0015031 IEA protein transport
GO:0016021 IEA integral component of membrane
GO:0032964 IMP collagen biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000037998 Tram2-001 protein_coding Mus_musculus 0 1378
ENSMUST00000187210 Tram2-002 processed_transcript Mus_musculus 0 604

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