C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005N7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000096093-ENSG00000065308 CGP 9606 6:52420308-52576915
GeneTranscriptPositionBiotype
ENSG00000065308 (TRAM2)
translocation associated membrane protein 2 		ENST00000182527 (TRAM2-001) 52497402-52576915 protein_coding
ENSG00000096093 (EFHC1)
EF-hand domain (C-terminal) containing 1 		ENST00000371068 (EFHC1-001) 52420308-52495785 protein_coding
ENST00000480623 (EFHC1-002) 52420308-52492500 nonsense_mediated_decay
ENST00000481466 (EFHC1-004) 52488557-52492546 processed_transcript
ENST00000491749 (EFHC1-003) 52420362-52438556 processed_transcript
ENST00000538167 (EFHC1-201) 52423809-52495783 protein_coding
CIL_0005N7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000041809-ENSMUSG00000041779 CGP 10090 1:20951626-21079229
GeneTranscriptPositionBiotype
ENSMUSG00000041779 (Tram2)
translocating chain-associating membrane protein 2 		ENSMUST00000037998 (Tram2-001) 20996299-21079229 protein_coding
ENSMUST00000187210 (Tram2-002) 21004313-21043656 processed_transcript
ENSMUSG00000041809 (Efhc1)
EF-hand domain (C-terminal) containing 1 		ENSMUST00000038447 (Efhc1-001) 20951688-20990841 protein_coding
ENSMUST00000160782 (Efhc1-002) 20951626-20955527 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005N7_0001ENSG00000065308ENST00000182527ENSG00000096093ENST00000371068ENST00000480623ENST00000481466ENST00000491749ENST00000538167CIL_0005N7_0002ENSMUSG00000041779ENSMUST00000037998ENSMUST00000187210ENSMUSG00000041809ENSMUST00000038447ENSMUST00000160782
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005N7_0001ENSG00000065308ENST00000182527ENSG00000096093ENST00000371068ENST00000480623ENST00000481466ENST00000538167CIL_0005N7_0002ENSMUSG00000041779ENSMUST00000037998ENSMUSG00000041809ENSMUST00000038447ENSMUST00000160782
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000065308 ENST00000182527 14.215±0.00 7.864±0.00 1.724±0.00 0.714±0.34 7.101±0.78 5.929±1.86 1.808±0.97 3.346±1.23 6.747±2.56 3.522±0.96 0.878±0.33 5.085±1.87 14.703±1.80 10.458±0.13
ENSG00000096093 ENST00000371068 N/A 0.139±0.00 N/A N/A N/A 0.099±0.00 N/A 0.807±0.00 0.097±0.00 1.056±0.00 N/A 1.583±1.22 0.161±0.07 N/A
ENST00000480623 0.310±0.00 0.516±0.00 0.716±0.00 0.598±0.00 0.471±0.14 0.493±0.04 0.421±0.00 0.674±0.51 0.299±0.05 1.171±0.48 0.237±0.00 2.087±0.26 0.516±0.09 6.885±0.87
ENST00000481466 1.040±0.00 N/A N/A N/A 1.590±0.00 N/A N/A N/A 0.432±0.00 N/A N/A N/A N/A 9.085±0.00
ENST00000491749 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538167 N/A 0.393±0.00 N/A N/A N/A 0.092±0.00 0.123±0.00 N/A 0.097±0.00 1.818±0.00 0.051±0.00 N/A 0.124±0.00 1.580±0.14
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000041779 ENSMUST00000037998 6.747±1.19 1.164±0.13 4.181±0.15 1.461±0.00 4.700±0.55 3.470±0.71 1.870±0.09 1.942±0.22 2.166±0.82 5.539±0.29 0.587±0.09 11.088±3.77 8.779±4.71 3.624±1.83
ENSMUST00000187210 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000041809 ENSMUST00000038447 0.860±0.03 0.322±0.10 1.133±0.11 0.912±0.22 0.587±0.27 0.360±0.21 0.414±0.12 0.262±0.04 0.111±0.06 2.968±0.69 0.078±0.03 4.411±2.30 1.700±1.41 95.165±26.25
ENSMUST00000160782 N/A 0.590±0.23 N/A N/A 0.628±0.00 0.528±0.14 N/A 0.335±0.00 0.486±0.29 5.231±0.22 0.253±0.00 14.347±6.85 N/A 140.925±1.42

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