C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DNA meiotic recombinase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000216024 DMC1-001 ENSG00000100206 9606 - 22:38518949-38570286 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartLungOvaryPlacentaTestisENST00000216024
Transcript ID Brain Colon Heart Lung Ovary Placenta Testis
ENST00000216024 0.222±0.00 0.282±0.00 0.066±0.00 0.059±0.00 0.169±0.00 0.228±0.01 3.350±2.47

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005DK CIL_0005DK_0001 CGP 22:38483440-38570286
CIL_0005DL CIL_0005DL_0001 CGP 22:38518949-38656629

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000781 IEA chromosome, telomeric region
GO:0000794 IEA condensed nuclear chromosome
GO:0001541 IEA ovarian follicle development
GO:0001556 IEA oocyte maturation
GO:0003677 IEA DNA binding
GO:0003697 IEA single-stranded DNA binding
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA:IEA nucleus
GO:0005694 ISS chromosome
GO:0006200 IEA ATP catabolic process
GO:0006259 IEA DNA metabolic process
GO:0006281 IEA DNA repair
GO:0007126 TAS meiotic nuclear division
GO:0007129 IEA synapsis
GO:0007131 IEA reciprocal meiotic recombination
GO:0007141 IEA male meiosis I
GO:0007276 IEA gamete generation
GO:0007283 TAS spermatogenesis
GO:0007286 IEA spermatid development
GO:0007292 TAS female gamete generation
GO:0008094 IEA DNA-dependent ATPase activity
GO:0009432 IEA SOS response

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023065 Dmc1-201 protein_coding Mus_musculus 0 1613

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