C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: suppressor of Ty 16 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000216297 SUPT16H-001 ENSG00000092201 9606 - 14:21351472-21384266 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000216297
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000216297 17.431±0.00 8.011±0.00 1.784±0.00 5.967±0.44 11.311±2.70 7.335±0.10 3.989±2.98 6.577±3.86 3.680±2.40 2.582±0.12 7.086±0.00 12.455±5.22 13.913±4.23 21.570±8.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00027P CIL_00027P_0001 CGP 14:21287939-21384266
CIL_00078L CIL_00078L_0001 CGP 14:21351472-21456126

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005694 IEA chromosome
GO:0006260 IEA DNA replication
GO:0006281 IEA DNA repair
GO:0006337 TAS nucleosome disassembly
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0006368 TAS transcription elongation from RNA polymerase II promoter
GO:0010467 TAS gene expression
GO:0016032 TAS viral process
GO:0032786 TAS positive regulation of DNA-templated transcription, elongation
GO:0044822 IDA poly(A) RNA binding
GO:0050434 TAS positive regulation of viral transcription

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000046709 Supt16-201 protein_coding Mus_musculus 0 4543
ENSDART00000105895 cacna1sa-001 protein_coding Danio_rerio 0.00009 55

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