C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00027P_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000092200-ENSG00000092201 CGP 9606 14:21287939-21384266
GeneTranscriptPositionBiotype
ENSG00000092200 (RPGRIP1)
retinitis pigmentosa GTPase regulator interacting protein 1 		ENST00000382933 (RPGRIP1-002) 21317539-21351301 protein_coding
ENST00000400017 (RPGRIP1-001) 21287977-21351295 protein_coding
ENST00000553500 (RPGRIP1-007) 21320151-21325867 processed_transcript
ENST00000553927 (RPGRIP1-005) 21323924-21351298 retained_intron
ENST00000554303 (RPGRIP1-008) 21321373-21324898 protein_coding
ENST00000554750 (RPGRIP1-013) 21301149-21302969 retained_intron
ENST00000555322 (RPGRIP1-004) 21321359-21351301 nonsense_mediated_decay
ENST00000555489 (RPGRIP1-003) 21321917-21351301 nonsense_mediated_decay
ENST00000555587 (RPGRIP1-009) 21321364-21351301 protein_coding
ENST00000556336 (RPGRIP1-010) 21287939-21351301 protein_coding
ENST00000557351 (RPGRIP1-006) 21317553-21321290 protein_coding
ENST00000557606 (RPGRIP1-012) 21328599-21343165 protein_coding
ENST00000557771 (RPGRIP1-011) 21287939-21351301 protein_coding
ENSG00000092201 (SUPT16H)
suppressor of Ty 16 homolog (S. cerevisiae) 		ENST00000216297 (SUPT16H-001) 21351472-21384266 protein_coding
ENST00000552829 (SUPT16H-008) 21353560-21354943 retained_intron
ENST00000555752 (SUPT16H-002) 21372075-21384013 retained_intron
ENST00000555943 (SUPT16H-003) 21382975-21383981 protein_coding
ENST00000556217 (SUPT16H-007) 21369436-21384010 retained_intron
ENST00000556309 (SUPT16H-006) 21369349-21383946 nonsense_mediated_decay
ENST00000557394 (SUPT16H-004) 21351479-21358402 retained_intron
ENST00000557652 (SUPT16H-005) 21369820-21383995 nonsense_mediated_decay
CIL_00027P_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000057132-ENSMUSG00000035726 CGP 10090 14:52110704-52197239
GeneTranscriptPositionBiotype
ENSMUSG00000035726 (Supt16)
suppressor of Ty 16 		ENSMUST00000046709 (Supt16-201) 52160419-52197239 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00027P_0001ENSG00000092200ENST00000382933ENST00000400017ENST00000553500ENST00000553927ENST00000554303ENST00000554750ENST00000555322ENST00000555489ENST00000555587ENST00000556336ENST00000557351ENST00000557606ENST00000557771ENSG00000092201ENST00000216297ENST00000552829ENST00000555752ENST00000555943ENST00000556217ENST00000556309ENST00000557394ENST00000557652CIL_00027P_0002ENSMUSG00000035726ENSMUST00000046709
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00027P_0001ENSG00000092200ENST00000382933ENST00000400017ENST00000553927ENST00000554303ENST00000554750ENST00000555322ENST00000555489ENST00000555587ENST00000556336ENST00000557606ENSG00000092201ENST00000216297ENST00000557394CIL_00027P_0002ENSMUSG00000035726ENSMUST00000046709
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000092200 ENST00000382933 N/A 0.203±0.00 N/A 0.129±0.00 0.146±0.00 N/A 0.065±0.00 N/A N/A N/A N/A 0.034±0.02 N/A 27.195±8.30
ENST00000400017 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.023±0.00 N/A N/A
ENST00000553500 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553927 N/A N/A N/A N/A N/A 0.064±0.00 N/A N/A N/A 0.040±0.00 N/A 0.048±0.00 0.085±0.00 N/A
ENST00000554303 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.258±0.00 N/A N/A N/A N/A
ENST00000554750 N/A N/A N/A 0.068±0.00 N/A 0.074±0.00 0.112±0.00 0.071±0.00 N/A 0.055±0.00 N/A N/A N/A N/A
ENST00000555322 N/A 0.288±0.00 N/A N/A N/A N/A N/A 0.036±0.00 N/A N/A N/A 0.049±0.00 N/A N/A
ENST00000555489 0.206±0.00 N/A 0.080±0.00 0.068±0.00 0.296±0.00 0.072±0.00 N/A N/A 0.092±0.06 0.075±0.00 0.063±0.00 0.049±0.01 0.173±0.10 N/A
ENST00000555587 N/A N/A N/A N/A N/A N/A N/A 0.158±0.13 N/A N/A N/A N/A N/A N/A
ENST00000556336 N/A 0.068±0.00 N/A N/A N/A N/A 0.054±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000557351 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557606 0.310±0.00 N/A N/A N/A 0.246±0.00 N/A 0.470±0.24 N/A N/A N/A N/A N/A N/A N/A
ENST00000557771 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000092201 ENST00000216297 17.431±0.00 8.011±0.00 1.784±0.00 5.967±0.44 11.311±2.70 7.335±0.10 3.989±2.98 6.577±3.86 3.680±2.40 2.582±0.12 7.086±0.00 12.455±5.22 13.913±4.23 21.570±8.01
ENST00000552829 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555752 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555943 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556217 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556309 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557394 N/A 6.502±0.00 N/A N/A N/A 4.174±0.00 N/A 6.115±0.00 1.973±0.00 N/A 0.360±0.00 11.753±0.76 6.891±2.16 19.440±0.00
ENST00000557652 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000035726 ENSMUST00000046709 3.812±2.12 8.418±0.82 9.345±3.64 20.012±4.33 3.870±2.06 4.954±2.27 2.392±0.16 3.099±0.61 13.277±12.36 7.669±2.23 2.671±0.43 9.326±11.06 20.803±8.89 32.544±26.18

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