C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromodomain helicase DNA binding protein 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000219084 CHD9-019 ENSG00000177200 9606 + 16:53235137-53327451 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000219084
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000219084 1.701±0.00 1.684±0.00 1.529±0.00 2.511±0.64 2.570±0.71 1.874±0.00 1.414±0.14 2.766±1.69 1.062±0.00 4.573±2.18 1.101±0.54 3.292±1.43 0.593±0.09 1.541±0.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ON CIL_0007ON_0002 UCNEbase 16:51906374-55391377
CIL_00077Q CIL_00077Q_0001 CGP 16:52438005-53329150
CIL_0009C3 CIL_0009C3_0001 VISTA 16:52653279-53264699

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000048665 Chd9-201 protein_coding Mus_musculus 0 5903
ENSMUST00000109614 Chd9-202 protein_coding Mus_musculus 0 5555

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