C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lin-7 homolog B (C. elegans)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000221459 LIN7B-001 ENSG00000104863 9606 + 19:49114361-49118460 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLungMuscleOvaryTestisENST00000221459
Transcript ID Adipose Brain Breast Colon Heart Kidney Lung Muscle Ovary Testis
ENST00000221459 1.403±0.00 3.945±1.16 3.690±0.00 0.869±0.34 3.349±2.83 1.037±0.00 1.306±0.00 12.788±0.00 3.821±3.22 17.873±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003AS CIL_0003AS_0002 CGP 19:49085419-49118460

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005886 IEA plasma membrane
GO:0005911 IEA cell-cell junction
GO:0005923 IEA tight junction
GO:0006887 IEA exocytosis
GO:0007269 IEA neurotransmitter secretion
GO:0015031 IEA protein transport
GO:0019904 IPI protein domain specific binding
GO:0043005 IEA neuron projection
GO:0045202 IEA synapse
GO:0045211 IEA postsynaptic membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000003971 Lin7b-001 protein_coding Mus_musculus 0 765

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