C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003AS_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000077126-ENSDARG00000037932 CGP 7955 3:32062043-32081685
GeneTranscriptPositionBiotype
ENSDARG00000037932 (lin7b)
lin-7 homolog B (C. elegans) 		ENSDART00000139644 (lin7b-001) 32070871-32081685 protein_coding
ENSDART00000146509 (lin7b-002) 32070869-32081685 protein_coding
ENSDARG00000077126 (snrnp70)
small nuclear ribonucleoprotein 70 (U1) 		ENSDART00000055279 (snrnp70-001) 32062043-32070750 protein_coding
ENSDART00000126773 (snrnp70-201) 32062043-32070747 protein_coding
ENSDART00000127330 (snrnp70-002) 32062043-32065615 protein_coding
CIL_0003AS_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000104852-ENSG00000104863 CGP 9606 19:49085419-49118460
GeneTranscriptPositionBiotype
ENSG00000104852 (SNRNP70)
small nuclear ribonucleoprotein 70kDa (U1) 		ENST00000221448 (SNRNP70-003) 49085451-49108563 protein_coding
ENST00000401730 (SNRNP70-004) 49085451-49108603 nonsense_mediated_decay
ENST00000544278 (SNRNP70-006) 49102411-49108602 retained_intron
ENST00000595231 (SNRNP70-005) 49085495-49108605 nonsense_mediated_decay
ENST00000597936 (SNRNP70-008) 49085451-49090639 retained_intron
ENST00000598441 (SNRNP70-001) 49085423-49108479 protein_coding
ENST00000598984 (SNRNP70-007) 49085423-49102118 protein_coding
ENST00000599687 (SNRNP70-010) 49086524-49101668 retained_intron
ENST00000601065 (SNRNP70-002) 49085419-49108598 nonsense_mediated_decay
ENST00000601411 (SNRNP70-009) 49086480-49098459 protein_coding
ENSG00000104863 (LIN7B)
lin-7 homolog B (C. elegans) 		ENST00000221459 (LIN7B-001) 49114361-49118460 protein_coding
ENST00000391864 (LIN7B-002) 49114324-49118460 protein_coding
ENST00000465141 (LIN7B-005) 49116118-49117995 retained_intron
ENST00000469137 (LIN7B-003) 49114466-49118460 retained_intron
ENST00000474252 (LIN7B-004) 49115226-49118059 retained_intron
ENST00000486217 (LIN7B-006) 49114424-49115489 protein_coding
ENST00000595200 (LIN7B-007) 49114409-49118015 nonsense_mediated_decay
ENSG00000221916 (C19orf73)
chromosome 19 open reading frame 73 		ENST00000408991 (C19orf73-001) 49118397-49119140 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003AS_0001ENSDARG00000037932ENSDART00000139644ENSDART00000146509ENSDARG00000077126ENSDART00000055279ENSDART00000126773ENSDART00000127330CIL_0003AS_0002ENSG00000104852ENST00000221448ENST00000401730ENST00000544278ENST00000595231ENST00000597936ENST00000598441ENST00000598984ENST00000599687ENST00000601065ENST00000601411ENSG00000104863ENST00000221459ENST00000391864ENST00000465141ENST00000469137ENST00000474252ENST00000486217ENST00000595200ENSG00000221916ENST00000408991
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003AS_0001ENSDARG00000037932ENSDART00000139644ENSDART00000146509ENSDARG00000077126ENSDART00000055279ENSDART00000126773ENSDART00000127330CIL_0003AS_0002ENSG00000104852ENST00000221448ENST00000401730ENST00000544278ENST00000595231ENST00000597936ENST00000598441ENST00000598984ENST00000599687ENST00000601065ENSG00000104863ENST00000221459ENST00000391864ENST00000465141ENST00000469137ENST00000474252ENST00000486217ENST00000595200ENSG00000221916ENST00000408991
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000037932 ENSDART00000139644 N/A N/A N/A 31.935±1.51 N/A N/A 3.083±0.54 1.444±0.05 N/A N/A 6.972±0.00 N/A N/A N/A
ENSDART00000146509 N/A N/A N/A 23.792±1.07 N/A N/A 0.931±0.73 N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000077126 ENSDART00000055279 N/A N/A N/A 36.628±0.00 N/A N/A 4.139±0.00 N/A 1.598±0.00 N/A N/A N/A N/A N/A
ENSDART00000126773 N/A N/A N/A 39.846±23.13 N/A N/A 40.302±23.63 48.513±11.38 4.883±0.00 N/A 6.222±0.00 N/A N/A N/A
ENSDART00000127330 N/A N/A N/A 34.712±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000104852 ENST00000221448 40.633±0.00 68.555±0.00 N/A 23.941±20.09 30.255±0.00 38.067±0.00 16.873±0.00 21.326±18.71 12.054±0.00 50.793±0.00 11.057±0.00 49.671±27.44 54.918±38.29 35.427±17.66
ENST00000401730 N/A 12.748±0.00 N/A N/A 3.794±2.22 N/A 1.048±0.00 1.739±0.00 1.777±0.00 N/A 3.193±0.00 11.951±7.64 N/A N/A
ENST00000544278 7.593±0.00 39.785±0.00 N/A 13.633±0.00 18.703±0.00 7.039±0.00 2.749±0.00 22.673±0.00 5.622±0.00 N/A 1.147±0.00 28.534±12.12 6.634±0.00 11.855±4.58
ENST00000595231 N/A N/A 1.474±0.00 N/A 1.906±0.00 2.557±0.00 0.529±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000597936 N/A N/A 5.076±0.00 N/A 5.679±0.00 N/A 1.588±0.00 N/A N/A N/A 7.651±0.00 6.534±0.00 N/A N/A
ENST00000598441 26.053±0.00 N/A 2.443±0.00 36.529±0.00 15.953±10.34 15.601±12.69 8.981±8.18 39.826±0.00 11.257±7.48 85.315±0.00 22.607±0.00 26.308±19.65 31.828±0.00 25.752±1.72
ENST00000598984 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.463±0.00 22.520±0.00 N/A
ENST00000599687 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.823±0.00 N/A N/A
ENST00000601065 N/A N/A N/A N/A N/A N/A N/A N/A N/A 23.537±0.00 6.977±0.00 N/A 16.105±0.00 11.833±0.00
ENST00000601411 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000104863 ENST00000221459 1.403±0.00 N/A N/A 3.945±1.16 3.690±0.00 0.869±0.34 3.349±2.83 1.037±0.00 N/A 1.306±0.00 12.788±0.00 3.821±3.22 N/A 17.873±0.00
ENST00000391864 N/A 1.789±0.00 N/A 18.335±0.00 0.340±0.00 N/A 3.243±0.00 1.787±0.00 0.789±0.00 0.225±0.00 N/A N/A N/A N/A
ENST00000465141 N/A 0.598±0.00 2.091±0.00 3.013±0.00 0.572±0.00 N/A N/A 1.467±0.00 N/A N/A N/A 1.794±0.00 1.969±0.00 11.672±0.00
ENST00000469137 N/A 0.601±0.00 N/A N/A N/A 0.424±0.00 N/A N/A N/A N/A N/A 0.682±0.00 0.489±0.15 4.663±2.37
ENST00000474252 N/A N/A N/A N/A N/A 0.669±0.00 N/A N/A 1.269±0.00 0.271±0.00 N/A 2.142±0.00 2.091±0.00 N/A
ENST00000486217 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.246±0.00 N/A N/A
ENST00000595200 N/A 0.706±0.00 N/A N/A N/A N/A N/A N/A 0.047±0.00 1.715±0.00 N/A 0.324±0.00 0.301±0.00 N/A
ENSG00000221916 ENST00000408991 0.717±0.00 0.446±0.00 N/A 4.797±0.00 N/A 0.363±0.19 N/A 0.707±0.00 0.330±0.00 0.061±0.00 N/A 1.033±0.00 0.374±0.00 6.223±0.00

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