C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Sp4 transcription factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000222584 SP4-001 ENSG00000105866 9606 + 7:21428034-21514822 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000222584
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000222584 0.896±0.00 0.929±0.00 1.212±0.05 0.821±0.02 0.820±0.16 1.075±0.38 0.311±0.14 0.745±0.59 0.782±0.06 1.339±0.99 1.670±0.89 0.171±0.01 1.038±0.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008EX CIL_0008EX_0001 VISTA 7:20900156-21501303
CIL_0007P2 CIL_0007P2_0002 UCNEbase 7:21278351-22052549

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0003713 TAS transcription coactivator activity
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006357 IDA regulation of transcription from RNA polymerase II promoter
GO:0008016 IEA regulation of heart contraction
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026367 Sp4-201 protein_coding Mus_musculus 0 4761

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