C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytochrome P450, family 26, subfamily A, polypeptide 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000224356 CYP26A1-002 ENSG00000095596 9606 + 10:93073890-93077890 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastLiverPlacentaTestisENST00000224356
Transcript ID Breast Liver Placenta Testis
ENST00000224356 0.029±0.00 0.261±0.00 3.226±0.00 0.055±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000ZX CIL_0000ZX_0001 CGP 10:93060808-93077890
CIL_0000ZY CIL_0000ZY_0001 CGP 10:93073475-93482317

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001972 IDA retinoic acid binding
GO:0005506 IEA iron ion binding
GO:0005789 TAS endoplasmic reticulum membrane
GO:0006766 TAS vitamin metabolic process
GO:0006805 TAS xenobiotic metabolic process
GO:0007417 IEA central nervous system development
GO:0008152 TAS metabolic process
GO:0008401 IDA retinoic acid 4-hydroxylase activity
GO:0009952 IEA anterior/posterior pattern specification
GO:0014032 IEA neural crest cell development
GO:0016705 IEA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0019825 TAS oxygen binding
GO:0020037 NAS:IEA heme binding
GO:0034653 IDA retinoic acid catabolic process
GO:0042573 IEA retinoic acid metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0048384 IEA retinoic acid receptor signaling pathway
GO:0048387 TAS negative regulation of retinoic acid receptor signaling pathway
GO:0055114 IEA oxidation-reduction process
GO:0071300 IEA cellular response to retinoic acid

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025946 Cyp26a1-201 protein_coding Mus_musculus 0 2089

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