C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: acid-sensing (proton-gated) ion channel 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000228468 ASIC1-001 ENSG00000110881 9606 + 12:50057548-50083611 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PE CIL_0008PE_0001 VISTA 12:49905565-50507504
CIL_0008CC CIL_0008CC_0001 VISTA 12:49906068-50507455
CIL_00071Y CIL_00071Y_0001 CGP 12:49976923-50083611

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005261 IEA cation channel activity
GO:0005272 IEA sodium channel activity
GO:0005515 IEA protein binding
GO:0005887 IEA integral component of plasma membrane
GO:0006812 IEA cation transport
GO:0006814 IEA sodium ion transport
GO:0007613 IEA memory
GO:0008306 IEA associative learning
GO:0010447 IEA response to acidic pH
GO:0016020 IEA membrane
GO:0022839 IEA ion gated channel activity
GO:0034220 IEA ion transmembrane transport
GO:0042391 IEA regulation of membrane potential
GO:0045202 IEA synapse
GO:0046929 IEA negative regulation of neurotransmitter secretion
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023758 Asic1-201 protein_coding Mus_musculus 0 1978
ENSDART00000028603 asic1b-201 protein_coding Danio_rerio 0 573
ENSDART00000140236 asic1b-001 protein_coding Danio_rerio 0 573
ENSDART00000105541 asic1a-201 protein_coding Danio_rerio 0 473
ENSDART00000004588 asic1a-001 protein_coding Danio_rerio 0 473

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