C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: origin recognition complex, subunit 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000234296 ORC2-001 ENSG00000115942 9606 - 2:200908973-200963680 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000234296
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000234296 3.784±0.00 3.373±0.00 1.730±0.00 3.342±0.12 2.720±0.56 2.233±0.71 2.303±0.88 2.850±0.69 1.731±0.95 2.655±0.88 1.379±0.46 7.603±4.15 2.600±1.06 10.147±3.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002AW CIL_0002AW_0001 CGP 2:200889327-200963680
CIL_0002AT CIL_0002AT_0001 CGP 2:200908973-201071671

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000082 TAS G1/S transition of mitotic cell cycle
GO:0000122 TAS negative regulation of transcription from RNA polymerase II promoter
GO:0000278 TAS mitotic cell cycle
GO:0000785 IEA chromatin
GO:0000792 IEA heterochromatin
GO:0000808 IDA:IEA origin recognition complex
GO:0000939 IEA condensed chromosome inner kinetochore
GO:0003688 IEA DNA replication origin binding
GO:0005515 IPI protein binding
GO:0005634 IDA:IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0005664 IDA nuclear origin of replication recognition complex
GO:0005886 IDA plasma membrane
GO:0006260 IEA:TAS DNA replication
GO:0006270 TAS DNA replication initiation
GO:0016020 IDA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027198 Orc2-001 protein_coding Mus_musculus 0 1958
ENSMUST00000114325 Orc2-002 protein_coding Mus_musculus 0 1554

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