C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, H+ transporting, lysosomal 21kDa, V0 subunit b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000236067 ATP6V0B-004 ENSG00000117410 9606 + 1:43974948-43978289 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000236067
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000236067 25.695±0.00 51.714±0.00 22.131±18.97 25.100±0.00 16.677±15.44 9.950±8.64 130.097±0.00 60.912±0.00 33.297±32.45 13.305±7.86 6.517±4.75 22.415±0.00 34.174±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B8 CIL_0009B8_0001 VISTA 1:43734711-44337665
CIL_0008SF CIL_0008SF_0001 VISTA 1:43949748-44550457

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 TAS transporter activity
GO:0005773 IEA vacuole
GO:0006879 TAS cellular iron ion homeostasis
GO:0008286 TAS insulin receptor signaling pathway
GO:0010008 TAS endosome membrane
GO:0015078 IEA hydrogen ion transmembrane transporter activity
GO:0015991 IEA ATP hydrolysis coupled proton transport
GO:0015992 TAS proton transport
GO:0030670 TAS phagocytic vesicle membrane
GO:0033177 IEA proton-transporting two-sector ATPase complex, proton-transporting domain
GO:0033179 IEA proton-transporting V-type ATPase, V0 domain
GO:0033572 TAS transferrin transport
GO:0051701 TAS interaction with host
GO:0055085 TAS transmembrane transport
GO:0090382 TAS phagosome maturation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000150204 Atp6v0b-007 protein_coding Mus_musculus 0 1092
ENSMUST00000036380 Atp6v0b-001 protein_coding Mus_musculus 0 989
ENSMUST00000133530 Atp6v0b-002 retained_intron Mus_musculus 0 804
ENSMUST00000152356 Atp6v0b-003 retained_intron Mus_musculus 0 595
ENSMUST00000124974 Atp6v0b-004 retained_intron Mus_musculus 0 259

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