C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, H+ transporting, lysosomal V0 subunit B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000133530 Atp6v0b-002 ENSMUSG00000033379 10090 - 4:117884330-117885894 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLungOvaryTestisENSMUST00000133530
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Lung Ovary Testis
ENSMUST00000133530 51.189±1.57 24.252±0.00 49.118±0.00 65.286±12.30 70.080±17.43 31.406±7.35 92.631±16.56 62.268±12.55 55.856±16.66 39.086±8.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008SF CIL_0008SF_0002 VISTA 4:117346906-117947610
CIL_0009B8 CIL_0009B8_0002 VISTA 4:117528714-118131599
CIL_000029 CIL_000029_0002 CGP 4:117869260-117887333

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000236067 ATP6V0B-004 protein_coding Homo_sapiens 0 804
ENST00000468183 ATP6V0B-003 retained_intron Homo_sapiens 0 446
ENST00000471859 ATP6V0B-006 protein_coding Homo_sapiens 0 508
ENST00000472174 ATP6V0B-001 protein_coding Homo_sapiens 0 804
ENST00000472277 ATP6V0B-008 processed_transcript Homo_sapiens 0 329
ENST00000473485 ATP6V0B-002 retained_intron Homo_sapiens 0 804
ENST00000496131 ATP6V0B-010 retained_intron Homo_sapiens 8e-29 132
ENST00000498664 ATP6V0B-011 protein_coding Homo_sapiens 0 804
ENST00000532642 ATP6V0B-012 protein_coding Homo_sapiens 0 446

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