C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: interferon regulatory factor 2 binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000054960 Irf2bp2-001 ENSMUSG00000051495 10090 - 8:126588296-126593986 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000054960
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000054960 27.824±7.00 46.995±9.05 19.723±0.54 11.052±6.16 31.948±16.42 67.652±10.91 15.859±3.84 23.546±3.77 13.952±2.89 54.422±9.40 4.546±1.24 48.675±20.46 6.867±5.18 1.892±0.87

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007X4 CIL_0007X4_0002 VISTA 8:126236388-126837692
CIL_0006KE CIL_0006KE_0002 CGP 8:126426652-126593986

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000238647 IRF2BPL-001 protein_coding Homo_sapiens 0 209
ENST00000366609 IRF2BP2-002 protein_coding Homo_sapiens 0 2017
ENST00000366610 IRF2BP2-001 protein_coding Homo_sapiens 0 1188
ENST00000491430 IRF2BP2-003 processed_transcript Homo_sapiens 0 850

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