C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: islet amyloid polypeptide
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000240652 IAPP-001 ENSG00000121351 9606 + 12:21372884-21379978 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLiverLungOvaryTestisENST00000240652
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Liver Lung Ovary Testis
ENST00000240652 0.005±0.00 0.119±0.00 0.033±0.00 0.026±0.00 0.041±0.00 0.037±0.00 0.004±0.00 0.019±0.00 0.013±0.00 0.027±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005PW CIL_0005PW_0001 CGP 12:21131202-21419594
CIL_0005PZ CIL_0005PZ_0001 CGP 12:21264600-21419594
CIL_0006XQ CIL_0006XQ_0002 CGP 12:21354959-21471252

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005102 TAS receptor binding
GO:0005179 IEA hormone activity
GO:0005576 TAS:IEA extracellular region
GO:0005615 IEA extracellular space
GO:0006915 TAS apoptotic process
GO:0007165 TAS signal transduction
GO:0007267 TAS cell-cell signaling
GO:0019233 IEA sensory perception of pain
GO:0031018 TAS endocrine pancreas development
GO:0042755 IEA eating behavior
GO:0042802 IPI identical protein binding
GO:0043025 IEA neuronal cell body
GO:0045596 IEA negative regulation of cell differentiation
GO:0045779 IEA negative regulation of bone resorption

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.0001 53

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