C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: piwi-like RNA-mediated gene silencing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000245255 PIWIL1-001 ENSG00000125207 9606 + 12:130337887-130372637 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryTestisENST00000245255
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Testis
ENST00000245255 0.027±0.00 0.053±0.00 0.022±0.01 0.046±0.00 0.021±0.00 0.028±0.00 0.046±0.00 0.030±0.00 0.015±0.00 0.012±0.00 53.653±28.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00042V CIL_00042V_0001 CGP 12:130162459-130372637
CIL_00042U CIL_00042U_0001 CGP 12:130337887-130716281

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003727 IEA single-stranded RNA binding
GO:0003729 ISS mRNA binding
GO:0005515 IPI:IEA protein binding
GO:0005737 ISS cytoplasm
GO:0005844 IEA polysome
GO:0005845 IEA mRNA cap binding complex
GO:0006417 IEA regulation of translation
GO:0007275 IEA multicellular organismal development
GO:0007283 IEA spermatogenesis
GO:0007286 ISS spermatid development
GO:0019901 IEA protein kinase binding
GO:0031047 ISS gene silencing by RNA
GO:0033391 ISS chromatoid body
GO:0034584 ISS piRNA binding
GO:0034587 IEA piRNA metabolic process
GO:0043186 ISS P granule
GO:0051321 IEA meiotic cell cycle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000086056 Piwil1-201 protein_coding Mus_musculus 0 2228

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