C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DEAH (Asp-Glu-Ala-His) box polypeptide 40
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000251241 DHX40-001 ENSG00000108406 9606 + 17:59565525-59608345 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000251241
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000251241 6.289±0.00 7.189±0.00 3.273±0.00 3.677±0.24 1.941±0.32 3.983±2.60 2.298±0.90 5.588±0.00 2.320±2.17 3.178±0.05 2.099±0.00 5.000±1.82 3.697±1.21 6.510±3.63

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081F CIL_00081F_0001 VISTA 17:59485788-60087415
CIL_0008Y2 CIL_0008Y2_0001 VISTA 17:59536739-60138754
CIL_0008VS CIL_0008VS_0001 VISTA 17:59556856-60159441
CIL_000568 CIL_000568_0002 CGP 17:59565525-59696956

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0004386 IEA helicase activity
GO:0005524 IEA ATP binding
GO:0006200 IEA ATP catabolic process
GO:0006810 IEA transport
GO:0008026 IEA ATP-dependent helicase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000018569 Dhx40-001 protein_coding Mus_musculus 0 4037
ENSMUST00000131798 Dhx40-003 processed_transcript Mus_musculus 0 725
ENSMUST00000148263 Dhx40-002 protein_coding Mus_musculus 0 612
ENSMUST00000136977 Dhx40-004 processed_transcript Mus_musculus 0 464

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