C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000568_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000041586-ENSDARG00000090716 CGP 7955 15:16277261-16359213
GeneTranscriptPositionBiotype
ENSDARG00000041586 (dhx40)
DEAH (Asp-Glu-Ala-His) box polypeptide 40 		ENSDART00000101707 (dhx40-001) 16277261-16304203 protein_coding
CIL_000568_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000108406-ENSG00000141367 CGP 9606 17:59565525-59696956
GeneTranscriptPositionBiotype
ENSG00000108406 (DHX40)
DEAH (Asp-Glu-Ala-His) box polypeptide 40 		ENST00000251241 (DHX40-001) 59565525-59608345 protein_coding
ENST00000425628 (DHX40-002) 59565612-59607258 protein_coding
ENST00000538926 (DHX40-007) 59577266-59599481 protein_coding
ENST00000577549 (DHX40-003) 59603287-59607559 retained_intron
ENST00000577596 (DHX40-006) 59565611-59573756 nonsense_mediated_decay
ENST00000578204 (DHX40-008) 59599374-59605656 retained_intron
ENST00000580030 (DHX40-010) 59565623-59575364 protein_coding
ENST00000580218 (DHX40-004) 59565558-59574259 nonsense_mediated_decay
ENST00000583439 (DHX40-005) 59587921-59599667 retained_intron
ENST00000584385 (DHX40-009) 59565613-59573882 protein_coding
ENSG00000141367 (CLTC)
clathrin, heavy chain (Hc) 		ENST00000269122 (CLTC-001) 59619858-59696310 protein_coding
ENST00000393043 (CLTC-002) 59619858-59690826 protein_coding
ENST00000466513 (CLTC-006) 59664690-59667066 retained_intron
ENST00000472129 (CLTC-004) 59648240-59656231 retained_intron
ENST00000472651 (CLTC-008) 59683906-59693822 protein_coding
ENST00000475458 (CLTC-009) 59685117-59687147 protein_coding
ENST00000483176 (CLTC-005) 59655961-59663992 nonsense_mediated_decay
ENST00000496076 (CLTC-007) 59683714-59684509 retained_intron
ENST00000498711 (CLTC-003) 59689156-59695112 retained_intron
ENST00000579456 (CLTC-010) 59619932-59694114 protein_coding
ENST00000579815 (CLTC-012) 59670982-59677141 processed_transcript
ENST00000580081 (CLTC-014) 59619924-59647502 protein_coding
ENST00000584313 (CLTC-011) 59619943-59651316 nonsense_mediated_decay
ENST00000585198 (CLTC-013) 59647646-59648695 retained_intron
ENST00000621829 (CLTC-201) 59619689-59696956 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000568_0001ENSDARG00000041586ENSDART00000101707CIL_000568_0002ENSG00000108406ENST00000251241ENST00000425628ENST00000538926ENST00000577549ENST00000577596ENST00000578204ENST00000580030ENST00000580218ENST00000583439ENST00000584385ENSG00000141367ENST00000269122ENST00000393043ENST00000466513ENST00000472129ENST00000472651ENST00000475458ENST00000483176ENST00000496076ENST00000498711ENST00000579456ENST00000579815ENST00000580081ENST00000584313ENST00000585198ENST00000621829
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000568_0001ENSDARG00000041586ENSDART00000101707CIL_000568_0002ENSG00000108406ENST00000251241ENST00000425628ENST00000577549ENST00000577596ENST00000578204ENST00000580218ENSG00000141367ENST00000269122ENST00000393043ENST00000498711ENST00000579456
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000041586 ENSDART00000101707 N/A N/A N/A 1.799±0.41 N/A N/A 1.411±1.06 0.925±0.81 0.612±0.00 N/A 1.293±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000108406 ENST00000251241 6.289±0.00 7.189±0.00 3.273±0.00 3.677±0.24 1.941±0.32 3.983±2.60 2.298±0.90 5.588±0.00 2.320±2.17 3.178±0.05 2.099±0.00 5.000±1.82 3.697±1.21 6.510±3.63
ENST00000425628 N/A N/A N/A N/A 1.143±0.00 N/A 0.339±0.00 N/A N/A 3.579±0.00 N/A 3.646±0.00 3.927±0.00 7.173±0.00
ENST00000538926 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577549 N/A N/A N/A N/A 1.133±0.00 0.857±0.00 N/A N/A N/A N/A N/A N/A N/A 2.725±0.00
ENST00000577596 N/A N/A N/A N/A N/A N/A 1.921±0.00 N/A 11.461±0.00 N/A N/A N/A N/A N/A
ENST00000578204 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.494±0.00 N/A 8.119±0.00
ENST00000580030 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580218 N/A N/A 3.721±0.00 N/A N/A 3.825±0.00 N/A N/A N/A N/A 2.170±0.00 N/A N/A N/A
ENST00000583439 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584385 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000141367 ENST00000269122 N/A N/A 4.287±0.00 19.799±0.00 N/A 8.110±0.00 N/A 5.534±0.00 9.616±0.00 N/A N/A 17.423±5.48 23.487±19.92 24.736±0.00
ENST00000393043 N/A N/A N/A 47.636±0.00 33.218±0.00 33.759±0.00 6.720±0.00 24.824±0.00 N/A 33.060±0.00 8.061±0.00 29.327±14.72 N/A N/A
ENST00000466513 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472129 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472651 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475458 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483176 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496076 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498711 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 39.601±0.00 58.950±0.00 34.841±0.00
ENST00000579456 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 38.662±0.00 52.241±0.00 27.715±0.00
ENST00000579815 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580081 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584313 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585198 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000621829 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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