C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000252244 KRT1-001 ENSG00000167768 9606 - 12:52674736-52680407 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastKidneyLiverOvaryPlacentaTestisENST00000252244
Transcript ID Adipose Bladder Brain Breast Kidney Liver Ovary Placenta Testis
ENST00000252244 19.446±0.00 0.134±0.00 0.016±0.00 0.042±0.00 0.418±0.00 0.027±0.00 0.274±0.38 0.255±0.20 0.121±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033Q CIL_00033Q_000G CGP 12:52644558-52680407
CIL_00033Q CIL_00033Q_0008 CGP 12:52674736-52703463

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001867 IPI complement activation, lectin pathway
GO:0001895 IEP retina homeostasis
GO:0004872 NAS receptor activity
GO:0005198 IEA structural molecule activity
GO:0005515 IPI protein binding
GO:0005615 IDA extracellular space
GO:0005634 IDA nucleus
GO:0005856 TAS cytoskeleton
GO:0005882 IEA intermediate filament
GO:0005886 IEA plasma membrane
GO:0006979 NAS response to oxidative stress
GO:0016020 IDA membrane
GO:0030246 IPI carbohydrate binding
GO:0031012 IDA extracellular matrix
GO:0042730 NAS fibrinolysis
GO:0045095 IEA keratin filament
GO:0045765 NAS regulation of angiogenesis
GO:0050728 IEA negative regulation of inflammatory response
GO:0061436 IEA establishment of skin barrier
GO:0070062 IDA extracellular vesicular exosome
GO:0072562 IDA blood microparticle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000087996 Krt77-001 protein_coding Mus_musculus 0 381
ENSMUST00000023714 4732456N10Rik-001 protein_coding Mus_musculus 0 372

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