C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 77
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000087996 Krt77-001 ENSMUSG00000067594 10090 - 15:101858732-101869705 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastLiverMuscleOvaryPlacentaTestisENSMUST00000087996
Transcript ID Adrenal Bladder Brain Breast Liver Muscle Ovary Placenta Testis
ENSMUST00000087996 0.031±0.01 0.020±0.00 1.865±2.10 9.220±8.32 0.014±0.01 1.080±0.97 0.050±0.03 0.140±0.21 0.285±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033Q CIL_00033Q_000T CGP 15:101845428-101869705
CIL_00033Q CIL_00033Q_0013 CGP 15:101858732-101892920

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005856 IEA cytoskeleton
GO:0045095 IEA keratin filament
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000252242 KRT5-001 protein_coding Homo_sapiens 0 392
ENST00000252244 KRT1-001 protein_coding Homo_sapiens 0 381
ENST00000252250 KRT6C-001 protein_coding Homo_sapiens 0 444
ENST00000252252 KRT6B-001 protein_coding Homo_sapiens 0 433
ENST00000257951 KRT84-001 protein_coding Homo_sapiens 9.99995e-41 172
ENST00000267119 KRT71-001 protein_coding Homo_sapiens 0 370
ENST00000293308 KRT8-002 protein_coding Homo_sapiens 9.94922e-44 182
ENST00000293745 KRT72-201 protein_coding Homo_sapiens 0 331
ENST00000304620 KRT78-001 protein_coding Homo_sapiens 1e-28 132
ENST00000305748 KRT73-001 protein_coding Homo_sapiens 0 442
ENST00000309680 KRT2-001 protein_coding Homo_sapiens 0 420
ENST00000330722 KRT6A-001 protein_coding Homo_sapiens 0 449
ENST00000331817 KRT7-001 protein_coding Homo_sapiens 0 250
ENST00000332411 KRT76-001 protein_coding Homo_sapiens 0 438
ENST00000341809 KRT77-001 protein_coding Homo_sapiens 0 1144
ENST00000354310 KRT72-002 protein_coding Homo_sapiens 0 268
ENST00000396270 KRT8P39-001 processed_pseudogene Homo_sapiens 2e-31 141
ENST00000409686 KRT8P11-001 processed_pseudogene Homo_sapiens 7e-36 156
ENST00000414328 KRT8P45-001 processed_pseudogene Homo_sapiens 2e-36 158
ENST00000417996 KRT3-001 protein_coding Homo_sapiens 0 407
ENST00000430398 KRT8P21-001 processed_pseudogene Homo_sapiens 2e-16 92
ENST00000441609 KRT8P44-001 processed_pseudogene Homo_sapiens 3e-29 134
ENST00000453110 KRT8P17-001 processed_pseudogene Homo_sapiens 4e-28 130
ENST00000463294 KRT8P13-001 processed_pseudogene Homo_sapiens 1e-32 145
ENST00000468527 KRT8P12-002 processed_transcript Homo_sapiens 2e-25 121
ENST00000472924 KRT8P12-001 transcribed_processed_pseudogene Homo_sapiens 7e-36 156
ENST00000473150 KRT8P25-001 processed_pseudogene Homo_sapiens 2e-32 145
ENST00000489121 KRT8P36-001 processed_pseudogene Homo_sapiens 7e-36 156
ENST00000508125 KRT8P33-001 processed_pseudogene Homo_sapiens 1e-37 161
ENST00000512037 KRT8P46-001 processed_pseudogene Homo_sapiens 1e-32 145
ENST00000512863 KRT8P32-001 processed_pseudogene Homo_sapiens 7e-36 156
ENST00000519669 KRT8P3-001 processed_pseudogene Homo_sapiens 7.00005e-41 172
ENST00000533003 KRT8P7-001 processed_pseudogene Homo_sapiens 1e-32 145
ENST00000537672 KRT72-001 protein_coding Homo_sapiens 0 331
ENST00000546583 KRT8-005 retained_intron Homo_sapiens 1e-35 156
ENST00000546826 KRT8-013 protein_coding Homo_sapiens 3e-39 167
ENST00000546897 KRT8-003 protein_coding Homo_sapiens 9.94922e-44 182
ENST00000546934 KRT73-002 retained_intron Homo_sapiens 0 398
ENST00000547110 KRT78-003 protein_coding Homo_sapiens 8e-27 124
ENST00000547183 KRT127P-001 unprocessed_pseudogene Homo_sapiens 0.000000000000003 86
ENST00000547413 KRT8-016 protein_coding Homo_sapiens 3e-36 156
ENST00000548998 KRT8-014 protein_coding Homo_sapiens 2e-39 167
ENST00000549420 KRT5-005 protein_coding Homo_sapiens 0 239
ENST00000549898 KRT6A-002 retained_intron Homo_sapiens 0 217
ENST00000550170 KRT8-008 retained_intron Homo_sapiens 8e-37 159
ENST00000550823 KRT77-003 retained_intron Homo_sapiens 0 239
ENST00000551013 KRT5-006 retained_intron Homo_sapiens 8e-23 111
ENST00000552150 KRT8-004 protein_coding Homo_sapiens 9.94922e-44 182
ENST00000552551 KRT8-001 protein_coding Homo_sapiens 2.00386e-43 182
ENST00000552629 KRT5-002 retained_intron Homo_sapiens 0 394
ENST00000553168 KRT77-002 nonsense_mediated_decay Homo_sapiens 0 891
ENST00000558927 KRT8P9-001 processed_pseudogene Homo_sapiens 5e-32 143

Loading