C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 27 (fatty acid transporter), member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000252595 SLC27A1-001 ENSG00000130304 9606 + 19:17470444-17506168 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000252595
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000252595 13.632±0.00 9.899±0.00 10.319±0.00 20.860±0.00 7.037±0.00 2.336±0.00 3.466±0.00 1.130±0.00 2.480±1.69 10.899±8.06 6.765±2.15 7.339±1.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00051F CIL_00051F_0001 CGP 19:17455425-17506168
CIL_000769 CIL_000769_0001 CGP 19:17468769-17521288

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0001579 IEA medium-chain fatty acid transport
GO:0003824 IEA catalytic activity
GO:0005783 IEA endoplasmic reticulum
GO:0005886 TAS plasma membrane
GO:0006631 IEA fatty acid metabolic process
GO:0006646 IMP phosphatidylethanolamine biosynthetic process
GO:0006654 IMP phosphatidic acid biosynthetic process
GO:0006655 IMP phosphatidylglycerol biosynthetic process
GO:0006656 IMP phosphatidylcholine biosynthetic process
GO:0006659 IMP phosphatidylserine biosynthetic process
GO:0006661 IMP phosphatidylinositol biosynthetic process
GO:0008152 IEA metabolic process
GO:0009409 IEA response to cold
GO:0015245 IEA fatty acid transporter activity
GO:0015908 IEA fatty acid transport
GO:0015909 TAS long-chain fatty acid transport
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0031652 IEA positive regulation of heat generation
GO:0031957 IEA very long-chain fatty acid-CoA ligase activity
GO:0032049 IMP cardiolipin biosynthetic process
GO:0032868 IEA response to insulin
GO:0033211 IEA adiponectin-activated signaling pathway
GO:0042803 IEA protein homodimerization activity
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0055085 TAS transmembrane transport
GO:0071072 IMP negative regulation of phospholipid biosynthetic process
GO:0071902 IEA positive regulation of protein serine/threonine kinase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034267 Slc27a1-201 protein_coding Mus_musculus 0 1941
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.000005 58

Loading