C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: translocase of inner mitochondrial membrane 10B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000106783 Timm10b-001 ENSMUSG00000089847 10090 + 7:105640056-105643637 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonLiverMuscleOvaryENSMUST00000106783
Transcript ID Breast Colon Liver Muscle Ovary
ENSMUST00000106783 3.950±0.00 19.335±0.86 5.453±0.00 2.761±0.00 16.059±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004A8 CIL_0004A8_0002 CGP 7:105604463-105640416
CIL_0004HY CIL_0004HY_0002 CGP 7:105634203-105655748
CIL_0004HZ CIL_0004HZ_0002 CGP 7:105640056-105721799

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0015031 IEA protein transport
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000254584 ARFIP2-008 protein_coding Homo_sapiens 3e-26 124
ENST00000254616 TIMM10B-001 protein_coding Homo_sapiens 0 414
ENST00000396777 ARFIP2-001 protein_coding Homo_sapiens 0 224
ENST00000423813 ARFIP2-010 protein_coding Homo_sapiens 0 224
ENST00000445086 ARFIP2-009 protein_coding Homo_sapiens 5e-37 159
ENST00000464330 TIMM10B-002 nonsense_mediated_decay Homo_sapiens 0 228
ENST00000472836 TIMM10B-001 nonsense_mediated_decay Homo_sapiens 0 414
ENST00000525235 ARFIP2-005 protein_coding Homo_sapiens 9e-28 128
ENST00000528908 TIMM10B-004 retained_intron Homo_sapiens 0 381
ENST00000529847 ARFIP2-002 retained_intron Homo_sapiens 3e-37 159
ENST00000530410 ARFIP2-003 retained_intron Homo_sapiens 6e-20 102
ENST00000530751 TIMM10B-005 protein_coding Homo_sapiens 0 228
ENST00000531037 ARFIP2-007 nonsense_mediated_decay Homo_sapiens 5e-33 147
ENST00000531462 TIMM10B-007 nonsense_mediated_decay Homo_sapiens 0 228
ENST00000533379 TIMM10B-006 nonsense_mediated_decay Homo_sapiens 0 414
ENST00000614314 ARFIP2-201 protein_coding Homo_sapiens 0 224

Loading