C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: synaptotagmin IV
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000255224 SYT4-001 ENSG00000132872 9606 - 18:43267878-43277650 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverMuscleOvaryENST00000255224
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Muscle Ovary
ENST00000255224 0.005±0.00 0.009±0.00 0.013±0.00 19.810±3.29 0.007±0.00 0.111±0.00 0.015±0.00 0.004±0.00 0.002±0.00 0.518±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003WU CIL_0003WU_0001 CGP 18:42743227-43277650

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000149 IEA SNARE binding
GO:0001786 IEA phosphatidylserine binding
GO:0005215 IEA transporter activity
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0006887 IEA exocytosis
GO:0007269 IEA neurotransmitter secretion
GO:0008021 IEA synaptic vesicle
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030054 IEA cell junction
GO:0030276 IEA clathrin binding
GO:0031045 IEA dense core granule
GO:0031339 IEA negative regulation of vesicle fusion
GO:0043005 IEA neuron projection
GO:0045955 IEA negative regulation of calcium ion-dependent exocytosis
GO:0048471 IEA perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025110 Syt4-201 protein_coding Mus_musculus 0 1581

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